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IDSAVERM_3606 TypeCDS
From4464253 nt length1056
To4465308 aa length351
GenecbiM pI10.66
Definitionputative cobalt ABC transporter permease protein M.W (Da)35501
NotePF01891: CbiM AseI frg.E
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO3159 putative membrane protein5450.0e+00
sgrSGR_4321 putative membrane protein4681.0e-166
samSAM23877_3205 putative cobalt ABC transporter permease protein5120.0e+00
scabSCAB53361 putative cobalt ABC transporter permease protein4329.0e-153
saceSACE_3840 cobalamin (vitamin B12) biosynthesis CbiM protein1942.0e-61
bsubBG10580 gtcA, ywcD, ipa-34d; similar to teichoic acid glycosylation protein319.6e-02

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; bsub, Bacillus subtilis;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CbiM1Cobalt uptake substrate-specific transmembrane region2-208198.11.4e-58

PDGLE1PDGLE domain257-33453.71.4e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_168528567.1 energy-coupling factor ABC transporter permease [Streptomyce... 11685.2e-158
WP_081217758.1 energy-coupling factor ABC transporter permease [Streptomyce... 11652.3e-157
WP_148008840.1 energy-coupling factor ABC transporter permease [Streptomyce... 11633.4e-157
WP_060896180.1 energy-coupling factor ABC transporter permease [Streptomyce... 11617.5e-157
WP_095854179.1 MULTISPECIES: energy-coupling factor ABC transporter permeas... 11581.7e-156
WP_095934904.1 energy-coupling factor ABC transporter permease [Streptomyce... 11591.8e-156
WP_097285073.1 MULTISPECIES: energy-coupling factor ABC transporter permeas... 11573.0e-156
WP_143601908.1 MULTISPECIES: energy-coupling factor ABC transporter permeas... 11573.0e-156
WP_099922209.1 MULTISPECIES: energy-coupling factor ABC transporter permeas... 11548.6e-156
WP_189186418.1 energy-coupling factor ABC transporter permease [Streptomyce... 11549.0e-156

PSORT result

LocalizationCertaintyPSORT said
membrane0.4227 Seems to have a cleavable N-term signal seq.