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IDSAVERM_367 TypeCDS
From434410 nt length2853
To437262 aa length950
GenehelZ1 pI7.14
Definitionputative SNF2/RAD54 family helicase M.W (Da)103449
NotePF00176: SNF2 family N-terminal domain AseI frg.A
SignalP v.4.0Non-secretory protein | plot CategoryDNA modification & repair


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
saceSACE_1609 probable helicase, Snf2/Rad54 family5520.0e+00
nfarnfa10310 helicase5294.0e-151
mtubgi|15609238 PROBABLE HELICASE HELZ [Mycobacterium tuberculosis H37Rv]5555.2e-159
cglugi|19552388 COG0553:Superfamily II DNA/RNA helicases, SNF2 family [Corynebacterium glutamicum]4515.6e-128
bsubBG12505 ywqA; similar to SNF2 helicase4754.5e-135
paerPA0799 [gene=PA0799] [prot=probable helicase] [comment=PA0799]3581.3e-99

*sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SNF2_N1SNF2 family N-terminal domain499-758169.01.1e-49

DUF36701SNF2 Helicase protein307-436127.72.5e-37

Helicase_C1Helicase conserved C-terminal domain780-89069.03.7e-19

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_232837819.1 DEAD/DEAH box helicase [Streptomyces atratus] 41350.0e+00
WP_229845795.1 DEAD/DEAH box helicase [Streptomyces atratus] 41210.0e+00
WP_168534526.1 DEAD/DEAH box helicase [Streptomyces sp. RPA4-2] >gb 41210.0e+00
AXE80739.1 ATP-dependent helicase [Streptomyces atratus] 41200.0e+00
WP_112454104.1 DEAD/DEAH box helicase [Streptomyces sp. ICC1] >gb 41190.0e+00
WP_112463877.1 DEAD/DEAH box helicase [Streptomyces sp. ICC4] >gb 41170.0e+00
GGT18576.1 helicase [Streptomyces atratus] 41070.0e+00
WP_071365634.1 DEAD/DEAH box helicase [Streptomyces colonosanans] >gb 40660.0e+00
WP_234375474.1 DEAD/DEAH box helicase [Streptomyces sp. CB01373] 40220.0e+00
WP_230396368.1 DEAD/DEAH box helicase [Streptomyces blattellae] 40050.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear Seems to have no N-terminal signal seq.