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IDSAVERM_3683 TypeCDS
From4558240 nt length1257
To4559496 aa length418
Gene pI8.14
Definitionhypothetical protein M.W (Da)44960
NotePF06772: Bacterial low temperature requirement A protein (LtrA) AseI frg.G1
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO3192 putative integral membrane protein5580.0e+00
sgrSGR_2430 conserved hypothetical protein1972.0e-59
samSAM23877_3241 putative integral membrane protein6030.0e+00
scabSCAB53021 hypothetical protein4422.0e-156
saceSACE_1900 low temperature requirement A3066.0e-102
nfarnfa3130 hypothetical protein741.8e-14

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LtrA1Bacterial low temperature requirement A protein (LtrA)44-383311.76.1e-93

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_110628739.1 MULTISPECIES: low temperature requirement protein A [Strepto... 15910.0e+00
WP_028804851.1 low temperature requirement protein A [Streptomyces sp. 142M... 15900.0e+00
NUS29886.1 low temperature requirement protein A [Streptomyces sp.] 15830.0e+00
WP_095934927.1 low temperature requirement protein A [Streptomyces sp. Tue6... 15780.0e+00
WP_212727269.1 low temperature requirement protein A [Streptomyces mirabili... 15770.0e+00
WP_016436485.1 low temperature requirement protein A [Streptomyces sp. HGB0... 15770.0e+00
WP_168492575.1 low temperature requirement protein A [Streptomyces sp. RLB1... 15770.0e+00
GGN62406.1 membrane protein [Streptomyces albiflavescens] 15730.0e+00
WP_189186394.1 low temperature requirement protein A [Streptomyces albiflav... 15680.0e+00
WP_046261464.1 low temperature requirement protein A [Streptomyces sp. WM63... 15680.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.4163 Seems to have no N-terminal signal seq.