| ID | SAVERM_3728
| Type | CDS
|
| From | 4615940
| nt length | 1140
|
| To | 4614801
| aa length | 379
|
| Gene | int8
| pI | 10.66
|
| Definition | putative tyrosine-family recombinase/integrase
| M.W (Da) | 42031
|
| Note | PF00589: Phage integrase family
| AseI frg. | G1
|
| SignalP v.4.0 | Signal peptide | plot
| Category | phage-related functions
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3997 putative integrase | 151 | 6.0e-43
|
| scab | SCAB46981 putative tyrosine-family recombinase/integrase | 150 | 1.0e-42
|
| sace | SACE_1121 phage integrase | 92 | 2.0e-21
|
| nfar | nfa7110 phage integrase | 130 | 1.9e-31
|
| mtub | gi|15609796 PROBABLE phiRv2 PROPHAGE INTEGRASE [Mycobacterium tuberculosis H37Rv] | 238 | 3.8e-64
|
| cglu | gi|19553083 COG0582:Integrase [Corynebacterium glutamicum] | 132 | 2.1e-32
|
| ecoli | gi|16129306 Rac prophage; putative transposase/integrase [Escherichia coli K12] | 53 | 2.2e-08
|
*coel, Streptomyces coelicolor A3(2); scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Phage_integrase | 1 | Phage integrase family | 191-352 | 74.7 | 6.8e-21
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1277 | Seems to have no N-terminal signal seq.
|