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IDSAVERM_3732 TypeCDS
From4618279 nt length192
To4618088 aa length63
GenespdB1 pI10.04
Definitionputative mobile element transfer protein SpdB M.W (Da)6949
NotePF05122: Mobile element transfer protein AseI frg.G1
SignalP v.4.0Non-secretory protein | plot Categoryplasmid transfer

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO5342 spdB2 SpdB2 protein763.0e-21
samSAM23877_4070 SpdB777.0e-22

*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SpdB1Mobile element transfer protein12-61107.82e-31

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_096239860.1 Mobile element transfer [Streptomyces olivochromogenes] >dbj... 3153.5e-37
WP_123975881.1 Mobile element transfer [Streptomyces sp. Ag109_O5-1] >gb 3111.6e-36
WP_030673588.1 MULTISPECIES: Mobile element transfer [Streptomyces] >gb 3111.7e-36
WP_046726952.1 Mobile element transfer [Streptomyces humi] 3102.2e-36
3102.3e-36
WP_095935165.1 Mobile element transfer [Streptomyces sp. Tue6028] >gb 3102.3e-36
KUN46565.1 Mobile element transfer [Streptomyces olivochromogenes] 3092.5e-36
WP_217235940.1 Mobile element transfer [Streptomyces sp. AC555_RSS877] 3093.2e-36
WP_095854131.1 MULTISPECIES: Mobile element transfer [unclassified Streptom... 3093.5e-36
WP_093500518.1 Mobile element transfer [Streptomyces sp. Ag109_O5-10] >emb 3083.7e-36

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.2256 Seems to have no N-terminal signal seq.