| ID | SAVERM_3865
| Type | CDS
|
| From | 4774716
| nt length | 1161
|
| To | 4773556
| aa length | 386
|
| Gene | fadE13
| pI | 5.64
|
| Definition | putative acyl-CoA dehydrogenase
| M.W (Da) | 41360
|
| Note | PF00441: Acyl-CoA dehydrogenase, C-terminal domain
| AseI frg. | G1
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of lipids
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4382 putative acyl CoA dehydrogenase | 645 | 0.0e+00
|
| sgr | SGR_3092 putative acyl-CoA dehydrogenase | 672 | 0.0e+00
|
| sam | SAM23877_3344 Acyl-CoA dehydrogenase fadE12 | 640 | 0.0e+00
|
| scab | SCAB51281 putative acyl-CoA dehydrogenase | 645 | 0.0e+00
|
| sace | SACE_3243 acyl-CoA dehydrogenase | 572 | 0.0e+00
|
| nfar | nfa53280 fadE44 acyl-CoA dehydrogenase | 502 | 2.4e-143
|
| mtub | gi|15608112 PROBABLE ACYL-CoA DEHYDROGENASE FADE12 [Mycobacterium tuberculosis H37Rv] | 522 | 1.3e-149
|
| paer | PA0879 [gene=PA0879] [prot=probable acyl-CoA dehydrogenase] [comment=PA0879] | 223 | 1.8e-59
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Acyl-CoA_dh_1 | 1 | Acyl-CoA dehydrogenase, C-terminal domain | 231-365 | 104.6 | 5e-30
|
| Acyl-CoA_dh_N | 1 | Acyl-CoA dehydrogenase, N-terminal domain | 7-117 | 96.2 | 1.7e-27
|
| Acyl-CoA_dh_M | 1 | Acyl-CoA dehydrogenase, middle domain | 122-216 | 64.1 | 9.7e-18
|
| Acyl-CoA_dh_2 | 1 | Acyl-CoA dehydrogenase, C-terminal domain | 245-347 | 42.5 | 6.7e-11
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.3060 | Seems to have no N-terminal signal seq.
|