| ID | SAVERM_3868
| Type | CDS
|
| From | 4779944
| nt length | 1689
|
| To | 4778256
| aa length | 562
|
| Gene |
| pI | 5.83
|
| Definition | hypothetical protein
| M.W (Da) | 59590
|
| Note | PF07287: Protein of unknown function (DUF1446)
| AseI frg. | G1
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4379 conserved hypothetical protein | 892 | 0.0e+00
|
| sgr | SGR_3095 conserved hypothetical protein | 814 | 0.0e+00
|
| sam | SAM23877_3347 hypothetical protein | 877 | 0.0e+00
|
| scab | SCAB51251 hypothetical protein | 903 | 0.0e+00
|
| sace | SACE_3240 hypothetical conserved protein | 696 | 0.0e+00
|
| nfar | nfa53320 hypothetical protein | 751 | 0.0e+00
|
| mtub | gi|15608116 hypothetical protein Rv0976c [Mycobacterium tuberculosis H37Rv] | 748 | 0.0e+00
|
| paer | PA2886 [gene=PA2886] [prot=hypothetical protein] [comment=PA2886] | 311 | 1.3e-85
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| AtuA | 1 | Acyclic terpene utilisation family protein AtuA | 10-331 | 409.4 | 8.4e-123
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202498163.1 | DUF1446 domain-containing protein [Streptomyces sp. SID5469]
| 2634 | 0.0e+00 |
| WP_094217199.1 | DUF1446 domain-containing protein [Streptomyces diastatochro...
| 2350 | 0.0e+00 |
| WP_221750334.1 | acyclic terpene utilization AtuA family protein [Streptomyce...
| 2342 | 0.0e+00 |
| WP_067315868.1 | DUF1446 domain-containing protein [Streptomyces griseochromo...
| 2339 | 0.0e+00 |
| WP_093746442.1 | DUF1446 domain-containing protein [Streptomyces sp. PAN_FS17...
| 2328 | 0.0e+00 |
| WP_150501674.1 | DUF1446 domain-containing protein [Streptomyces chartreusis]...
| 2328 | 0.0e+00 |
| WP_176576634.1 | DUF1446 domain-containing protein [Streptomyces chartreusis]...
| 2327 | 0.0e+00 |
| WP_189871848.1 | DUF1446 domain-containing protein [Streptomyces viridiviolac...
| 2327 | 0.0e+00 |
| WP_097253957.1 | DUF1446 domain-containing protein [Streptomyces sp. Ag109_G2...
| 2324 | 0.0e+00 |
| WP_125527584.1 | DUF1446 domain-containing protein [Streptomyces sp. WAC 0537...
| 2324 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1426 | Seems to have no N-terminal signal seq.
|