| ID | SAVERM_3869
| Type | CDS
|
| From | 4780744
| nt length | 804
|
| To | 4779941
| aa length | 267
|
| Gene |
| pI | 5.04
|
| Definition | hypothetical protein
| M.W (Da) | 28883
|
| Note | PF07398: Protein of unknown function (DUF1503)
| AseI frg. | G1
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4378 conserved hypothetical protein | 353 | 3.0e-124
|
| sgr | SGR_3096 conserved hypothetical protein | 308 | 8.0e-107
|
| sam | SAM23877_3348 hypothetical protein | 386 | 9.0e-138
|
| scab | SCAB51241 hypothetical protein | 365 | 4.0e-129
|
| sace | SACE_3125 hypothetical protein | 274 | 4.0e-93
|
| nfar | nfa56200 hypothetical protein | 310 | 1.1e-85
|
| mtub | gi|15607178 hypothetical protein Rv0036c [Mycobacterium tuberculosis H37Rv] | 284 | 3.8e-78
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| MDMPI_N | 1 | Mycothiol maleylpyruvate isomerase N-terminal domain | 11-147 | 115.1 | 3.7e-33
|
| DinB_2 | 1 | DinB superfamily | 12-118 | 41.9 | 1.2e-10
|
| Wyosine_form | 1 | Wyosine base formation | 185-233 | 35.1 | 1.1e-08
|
| DUF664 | 1 | Protein of unknown function (DUF664) | 11-121 | 23.0 | 7.9e-05
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_235457645.1 | TIGR03084 family metal-binding protein [Streptomyces olivoch...
| 1037 | 8.8e-141 |
|
| 1035 | 2.1e-140 |
| WP_225834075.1 | TIGR03084 family metal-binding protein [Streptomyces sp. NK0...
| 1027 | 3.2e-139 |
| WP_217236897.1 | TIGR03084 family metal-binding protein [Streptomyces sp. AC5...
| 1026 | 4.6e-139 |
|
| 1025 | 5.9e-139 |
| WP_031478809.1 | TIGR03084 family metal-binding protein [Streptomyces bicolor...
| 1024 | 8.6e-139 |
| WP_019057301.1 | TIGR03084 family metal-binding protein [Streptomyces prunico...
| 1022 | 2.6e-138 |
| WP_147999937.1 | TIGR03084 family metal-binding protein [Streptomyces sp. uw3...
| 1021 | 3.0e-138 |
| WP_095752033.1 | TIGR03084 family metal-binding protein [Streptomyces sp. SA1...
| 1021 | 3.0e-138 |
| WP_126393020.1 | TIGR03084 family metal-binding protein [Streptomyces cyaneoc...
| 1018 | 8.4e-138 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2334 | Seems to have no N-terminal signal seq.
|