| ID | SAVERM_3871
| Type | CDS
|
| From | 4783797
| nt length | 954
|
| To | 4782844
| aa length | 317
|
| Gene |
| pI | 11.67
|
| Definition | putative ABC transporter permease protein
| M.W (Da) | 31816
|
| Note | PF00892: Integral membrane protein DUF6
| AseI frg. | G1
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4374 putative integral membrane protein | 389 | 2.0e-137
|
| sgr | SGR_3100 putative integral membrane protein | 343 | 4.0e-119
|
| sam | SAM23877_3350 Threonine/homoserine exporter RhtA | 409 | 8.0e-145
|
| scab | SCAB51231 putative ABC transporter permease protein | 410 | 3.0e-145
|
| sace | SACE_1858 protein of unknown function DUF6, transmembrane | 194 | 4.0e-61
|
| cglu | gi|19551839 COG0697:Permeases of the drug/metabolite transporter (DMT) superfamily [Corynebacterium glutamicum] | 219 | 1.7e-58
|
| ecoli | gi|16128781 putative transmembrane subunit [Escherichia coli K12] | 197 | 7.6e-52
|
| paer | PA1360 [gene=PA1360] [prot=conserved hypothetical protein] [comment=PA1360] | 232 | 2.9e-62
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| EamA | 1 | EamA-like transporter family | 171-300 | 70.3 | 1.7e-19
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_030042514.1 | EamA family transporter [Streptomyces resistomycificus] >gb
| 861 | 2.0e-112 |
| WP_033281161.1 | EamA family transporter [Streptomyces sp. NRRL F-525]
| 860 | 2.5e-112 |
| WP_078532628.1 | EamA family transporter [Streptomyces hokutonensis]
| 859 | 4.4e-112 |
| SEE19542.1 | inner membrane transporter RhtA [Streptomyces sp. 3213] [Strepto...
| 858 | 7.0e-112 |
| WP_078622870.1 | EamA family transporter [Streptomyces prunicolor]
| 858 | 7.6e-112 |
| WP_235029399.1 | EamA family transporter [Streptomyces sp. 3213.3]
| 856 | 8.6e-112 |
|
| 855 | 1.4e-111 |
|
| 855 | 1.5e-111 |
| WP_190228983.1 | EamA family transporter [Streptomyces umbrinus]
| 852 | 2.3e-111 |
| WP_210881073.1 | EamA family transporter [Streptomyces sp. BH-SS-21] >lcl
| 855 | 2.5e-111 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.5904 | Seems to have no N-terminal signal seq.
|