| ID | SAVERM_3938
| Type | CDS
|
| From | 4862502
| nt length | 246
|
| To | 4862257
| aa length | 81
|
| Gene |
| pI | 11.09
|
| Definition | hypothetical protein
| M.W (Da) | 9296
|
| Note | PF11662: Protein of unknown function (DUF3263)
| AseI frg. | G1
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4287 hypothetical protein | 102 | 4.0e-31
|
| sgr | SGR_4058 conserved hypothetical protein | 106 | 2.0e-32
|
| sam | SAM23877_3419 hypothetical protein | 100 | 3.0e-30
|
| scab | SCAB50361 hypothetical protein | 107 | 6.0e-33
|
| sace | SACE_0515 hypothetical protein | 72 | 2.0e-18
|
| nfar | nfa53000 hypothetical protein | 77 | 2.3e-16
|
| mtub | gi|15607571 hypothetical protein Rv0430 [Mycobacterium tuberculosis H37Rv] | 69 | 3.4e-14
|
| cglu | gi|19553931 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 56 | 2.2e-10
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF3263 | 1 | Protein of unknown function (DUF3263) | 9-81 | 107.4 | 2.3e-31
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| AZP23384.1 | DUF3263 domain-containing protein [Streptomyces aquilus]
| 279 | 4.5e-31 |
| GGN60933.1 | hypothetical protein GCM10011579_026650 [Streptomyces albiflaves...
| 277 | 7.8e-31 |
| WP_059195838.1 | MULTISPECIES: DUF3263 domain-containing protein [Streptomyce...
| 273 | 2.5e-30 |
| NUO46427.1 | DUF3263 domain-containing protein [Streptomyces sp.] >gb
| 272 | 2.9e-30 |
| WP_194084132.1 | DUF3263 domain-containing protein [Streptomyces justiciae] >...
| 273 | 3.1e-30 |
| OPG09980.1 | hypothetical protein B1R27_04495 [Streptomyces sp. GKU 895]
| 273 | 3.1e-30 |
| WP_189186166.1 | DUF3263 domain-containing protein [Streptomyces albiflavesce...
| 272 | 3.9e-30 |
| WP_153293052.1 | DUF3263 domain-containing protein [Streptomyces fagopyri] >g...
| 271 | 5.4e-30 |
| WP_148009463.1 | DUF3263 domain-containing protein [Streptomyces sp. me109] >...
| 271 | 5.4e-30 |
| SNX62094.1 | uncharacterized protein DUF3263 [Streptomyces sp. TLI_55]
| 271 | 6.4e-30 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1753 | Seems to have no N-terminal signal seq.
|