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IDSAVERM_3944 TypeCDS
From4869984 nt length1707
To4868278 aa length568
Gene pI6.02
Definitionhypothetical protein M.W (Da)62452
NotePF00990: GGDEF domain AseI frg.G1
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4281 hypothetical protein9640.0e+00
sgrSGR_4052 conserved hypothetical protein8530.0e+00
samSAM23877_3425 Diguanylate cyclase/phosphodiesterase9750.0e+00
scabSCAB50301 hypothetical protein10170.0e+00

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GGDEF1Diguanylate cyclase, GGDEF domain437-560122.11.7e-35

PAS1PAS fold237-31533.43.2e-08

PAS_91PAS domain236-32533.43.8e-08

PAS_81PAS domain217-26124.12.4e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_055490519.1 diguanylate cyclase CdgB [Streptomyces sp. TP-A0356] 25580.0e+00
WP_189186160.1 diguanylate cyclase CdgB [Streptomyces albiflavescens] >dbj 25460.0e+00
WP_234511016.1 diguanylate cyclase [Streptomyces glomeratus] >lcl 25270.0e+00
WP_200420959.1 diguanylate cyclase CdgB [Streptomyces sp. Y2F8-2] >dbj 25230.0e+00
WP_103839796.1 diguanylate cyclase CdgB [Streptomyces sp. Ru72] >gb 25180.0e+00
QIY96714.1 diguanylate cyclase [Streptomyces sp. S1D4-11] 25170.0e+00
WP_151483619.1 diguanylate cyclase CdgB [Streptomyces albicerus] 25090.0e+00
WP_095935124.1 diguanylate cyclase CdgB [Streptomyces sp. Tue6028] >gb 25070.0e+00
WP_045555995.1 MULTISPECIES: diguanylate cyclase CdgB [Streptomyces] >lcl 25060.0e+00
WP_192332314.1 diguanylate cyclase CdgB [Streptomyces caniscabiei] >lcl 25060.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.2752 Seems to have no N-terminal signal seq.