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IDSAVERM_3948 TypeCDS
From4873561 nt length855
To4872707 aa length284
Gene pI6.69
Definitionputative DNA-binding protein M.W (Da)31765
NotePF01381: Helix-turn-helix AseI frg.G1
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain13-7447.41.7e-12

HTH_191Helix-turn-helix domain17-6233.72.4e-08

HTH_31Helix-turn-helix18-6825.96.9e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_165339483.1 helix-turn-helix domain-containing protein [Streptomyces ure... 10174.8e-137
WP_125045942.1 helix-turn-helix domain-containing protein [Streptomyces chr... 9844.4e-132
WP_030376441.1 helix-turn-helix domain-containing protein [Streptomyces rim... 9836.7e-132
WP_031191237.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 9811.1e-131
WP_033322364.1 helix-turn-helix domain-containing protein [Streptomyces yer... 9811.2e-131
WP_030024461.1 helix-turn-helix domain-containing protein [Streptomyces mon... 9811.4e-131
WP_067020635.1 helix-turn-helix domain-containing protein [Streptomyces dys... 9671.9e-129
WP_200304085.1 helix-turn-helix domain-containing protein [Streptomyces ade... 9662.1e-129
WP_030680855.1 helix-turn-helix domain-containing protein [Streptomyces rim... 9662.2e-129
WP_175519291.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 9644.3e-129

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.3922 Seems to have no N-terminal signal seq.