| ID | SAVERM_3972
| Type | CDS
|
| From | 4898742
| nt length | 672
|
| To | 4898071
| aa length | 223
|
| Gene | phoP
| pI | 4.83
|
| Definition | putative two-component system response regulator
| M.W (Da) | 24774
|
| Note | PF00072: Response regulator receiver domain
| AseI frg. | G1
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | regulation
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4230 putative response regulator | 437 | 5.0e-159
|
| sgr | SGR_4009 putative two-component system response regulator | 434 | 7.0e-158
|
| sam | SAM23877_3470 Sensory transduction protein regX3 | 434 | 5.0e-158
|
| scab | SCAB50051 putative two-component system response regulator | 442 | 5.0e-161
|
| sace | SACE_6965 two-component response regulator | 362 | 1.0e-129
|
| nfar | nfa51860 two-component system response regulator | 327 | 5.2e-91
|
| mtub | gi|15607632 TWO COMPONENT SENSORY TRANSDUCTION PROTEIN REGX3 (TRANSCRIPTIONAL REGULATORY PROTEIN) (PROBABLY LUXR-FAMILY) [Mycobacterium tuberculosis H37Rv] | 332 | 1.6e-92
|
| cglu | gi|19551649 COG0745:Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Corynebacterium glutamicum] | 323 | 4.1e-90
|
| bsub | BG10001 yycF; two-component response regulator. potential cognate sensor kinase is YycG | 215 | 1.5e-57
|
| paer | PA0463 [gene=creB] [prot=two-component response regulator CreB] [comment=PA0463] | 176 | 2.0e-45
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Trans_reg_C | 1 | Transcriptional regulatory protein, C terminal | 146-221 | 98.0 | 2.3e-28
|
| Response_reg | 1 | Response regulator receiver domain | 2-110 | 94.4 | 4.3e-27
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| ELS54328.1 | putative Phosphate two component system response regulator [Strep...
| 971 | 5.1e-132 |
| AYN34552.1 | putative two-component system response regulator [Streptomyces al...
| 969 | 9.0e-132 |
| EMF56604.1 | two-component system response regulator [Streptomyces bottropensi...
| 968 | 1.4e-131 |
| WP_009340348.1 | MULTISPECIES: response regulator transcription factor [Strep...
| 968 | 1.4e-131 |
| WP_015659563.1 | MULTISPECIES: response regulator transcription factor [Strep...
| 966 | 2.6e-131 |
|
| 965 | 3.9e-131 |
| WP_046707143.1 | MULTISPECIES: response regulator transcription factor [Strep...
| 965 | 4.5e-131 |
| WP_040252049.1 | response regulator transcription factor [Streptomyces albus]...
| 965 | 4.7e-131 |
| WP_033322296.1 | MULTISPECIES: response regulator transcription factor [Strep...
| 964 | 5.8e-131 |
| WP_030223454.1 | response regulator transcription factor [Streptomyces sp. NR...
| 964 | 6.1e-131 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3062 | Seems to have no N-terminal signal seq.
|