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IDSAVERM_3978 TypeCDS
From4904975 nt length1308
To4903668 aa length435
Gene pI9.06
Definitionputative integral membrane transport protein M.W (Da)45485
NotePF07690: Major Facilitator Superfamily AseI frg.G1
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4208 putative integral membrane transport protein6640.0e+00
sgrSGR_4006 putative permease of the major facilitator superfamily6470.0e+00
samSAM23877_3488 Integral membrane transport protein6560.0e+00
scabSCAB49931 putative integral membrane transport protein6730.0e+00
mtubgi|15607982 PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv]1111.1e-25
bsubBG13925 yttB; similar to multidrug resistance protein1101.6e-25
ecoligi|49176075 multidrug transport protein (MFS family) [Escherichia coli K12]918.7e-20
paerPA1212 [gene=PA1212] [prot=probable MFS transporter] [comment=PA1212]1026.8e-23

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

MFS_12Major Facilitator Superfamily25-249, 229-410156.39.1e-46

Sugar_tr1Sugar (and other) transporter47-19640.02e-10

MFS_31Transmembrane secretion effector21-41839.22.7e-10

MFS_21MFS/sugar transport protein19-13629.23e-07

PTR21POT family116-19126.13.4e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
MYS99572.1 MFS transporter [Streptomyces sp. SID5469] 17650.0e+00
WP_071364273.1 MFS transporter [Streptomyces colonosanans] >gb 17030.0e+00
WP_095935172.1 MFS transporter [Streptomyces sp. Tue6028] >gb 16870.0e+00
WP_028804383.1 MFS transporter [Streptomyces sp. 142MFCol3.1] 16830.0e+00
WP_217454017.1 MFS transporter [Streptomyces sp. BV286] >lcl 16730.0e+00
QIZ01737.1 MFS transporter [Streptomyces sp. S1D4-11] 16690.0e+00
WP_103839835.1 MFS transporter [Streptomyces sp. Ru72] >gb 16670.0e+00
WP_217567436.1 MFS transporter [Streptomyces sp. GbtcB7] 16640.0e+00
WP_179857107.1 MFS transporter [Streptomyces sp. OV198] >emb 16630.0e+00
WP_129798513.1 MFS transporter [Streptomyces sp. F001] >gb 16630.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.3697 Seems to have no N-terminal signal seq.