-- | --

IDSAVERM_4003 TypeCDS
From4923144 nt length813
To4923956 aa length270
Gene pI9.57
Definitionputative AraC-family transcriptional regulator M.W (Da)30423
NotePF02311: AraC-like ligand binding domain AseI frg.G1
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4206 putative AraC-family transcriptional regulator3953.0e-141
sgrSGR_4584 putative AraC-family transcriptional regulator3662.0e-129
samSAM23877_3490 putative AraC-family transcriptional regulator3874.0e-138
scabSCAB_NO3 putative AraC-family transcriptional regulator3782.0e-133
saceSACE_4718 AraC-family transcriptional regulator3342.0e-117
paerPA5342 [gene=PA5342] [prot=probable transcriptional regulator] [comment=PA5342]1515.3e-38

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AraC_binding1AraC-like ligand binding domain22-14375.14.3e-21

HTH_181Helix-turn-helix domain191-26770.97.7e-20

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
GGN60692.1 AraC family transcriptional regulator [Streptomyces albiflavesce... 10302.2e-139
WP_168528777.1 AraC family transcriptional regulator [Streptomyces sp. RPA4... 10283.2e-139
WP_153289872.1 AraC family transcriptional regulator [Streptomyces fagopyri... 10274.8e-139
WP_179022993.1 AraC family transcriptional regulator [Streptomyces sp. IMTB... 10222.5e-138
WP_189186115.1 AraC family transcriptional regulator [Streptomyces albiflav... 10135.6e-137
WP_055511302.1 MULTISPECIES: AraC family transcriptional regulator [Strepto... 10068.4e-136
WP_148009066.1 AraC family transcriptional regulator [Streptomyces sp. me10... 10051.3e-135
WP_175289859.1 AraC family transcriptional regulator [Streptomyces lunaelac... 10013.1e-135
WP_175262880.1 AraC family transcriptional regulator [Streptomyces lunaelac... 10004.9e-135
OLZ71426.1 AraC family transcriptional regulator [Streptomyces sp. IMTB 2501... 9997.3e-135

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.1382 Seems to have no N-terminal signal seq.