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IDSAVERM_4026 TypeCDS
From4948501 nt length597
To4947905 aa length198
GeneamfC pI6.3
Definitionputative AmfC protein M.W (Da)21817
Noteaerial mycelium formation AseI frg.G1
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4184 amfC aerial mycelium formation2559.0e-88
sgrSGR_3974 2212.0e-74
samSAM23877_3509 Aerial mycelium formation protein2684.0e-93
scabSCAB49711 putative AmfC protein2622.0e-90
saceSACE_7115 aerial mycelium formation952.0e-25

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_055490572.1 hypothetical protein [Streptomyces sp. TP-A0356] 6272.1e-80
WP_099503670.1 MULTISPECIES: hypothetical protein [Streptomyces] >gb 6091.8e-77
WP_143639506.1 AmfC protein [Streptomyces sp. IB201691-2A2] >lcl 6102.1e-77
QQM41785.1 hypothetical protein JEQ17_21585 [Streptomyces sp. ZYC-3] 6023.1e-76
WP_210963607.1 aerial mycelium formation protein [Streptomyces sp. b94] >lc... 5925.3e-75
WP_053133295.1 hypothetical protein [Streptomyces ambofaciens] 5915.7e-75
WP_217453991.1 hypothetical protein [Streptomyces sp. BV286] >lcl 5926.8e-75
WP_095752222.1 aerial mycelium formation protein [Streptomyces sp. SA15] >g... 5898.6e-75
WP_171144667.1 aerial mycelium formation protein [Streptomyces sp. S3(2020)... 5881.3e-74
WP_124441100.1 aerial mycelium formation protein [Streptomyces sp. NL15-2K] 5871.6e-74

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.3274 Seems to have no N-terminal signal seq.