| ID | SAVERM_4027
| Type | CDS
|
| From | 4948672
| nt length | 438
|
| To | 4949109
| aa length | 145
|
| Gene | dtd
| pI | 4.53
|
| Definition | putative D-tyrosyl-tRNA(Tyr) deacylase-like protein
| M.W (Da) | 15446
|
| Note | PF02580: D-Tyr-tRNA(Tyr) deacylase
| AseI frg. | G1
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | RNA modification
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4182 conserved hypothetical protein | 261 | 4.0e-92
|
| sgr | SGR_3973 putative D-tyrosyl-tRNA(Tyr) deacylase-like protein | 239 | 3.0e-83
|
| sam | SAM23877_3510 D-tyrosyl-tRNA(Tyr) deacylase | 258 | 3.0e-91
|
| scab | SCAB49701 putative D-tyrosyl-tRNA(Tyr) deacylase-like protein | 258 | 9.0e-91
|
| sace | SACE_1787 D-tyrosyl-tRNA(Tyr) deacylase | 119 | 7.0e-37
|
| nfar | nfa8060 hypothetical protein | 170 | 5.2e-44
|
| mtub | gi|15609034 D-tyrosyl-tRNA deacylase [Mycobacterium tuberculosis H37Rv] | 164 | 2.9e-42
|
| cglu | gi|19553122 COG1490:D-Tyr-tRNAtyr deacylase [Corynebacterium glutamicum] | 132 | 8.7e-33
|
| bsub | BG13805 yrvI; similar to hypothetical proteins | 109 | 7.6e-26
|
| ecoli | gi|16131727 D-tyrosyl-tRNA deacylase [Escherichia coli K12] | 103 | 6.1e-24
|
| paer | PA5079 [gene=PA5079] [prot=conserved hypothetical protein] [comment=PA5079] | 104 | 3.6e-24
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Tyr_Deacylase | 1 | D-Tyr-tRNA(Tyr) deacylase | 2-144 | 167.6 | 2.2e-49
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| SFE95964.1 | D-tyrosyl-tRNA(Tyr) deacylase [Streptomyces mirabilis]
| 717 | 8.3e-96 |
| WP_075026950.1 | D-aminoacyl-tRNA deacylase [Streptomyces mirabilis]
| 715 | 1.1e-95 |
| WP_160505836.1 | D-aminoacyl-tRNA deacylase [Streptomyces sp. BA2] >gb
| 714 | 2.2e-95 |
| PBC98007.1 | D-tyrosyl-tRNA(Tyr) deacylase [Streptomyces sp. Ag82_O1-15] >emb
| 711 | 5.7e-95 |
| WP_060897698.1 | MULTISPECIES: D-aminoacyl-tRNA deacylase [Streptomyces] >lcl...
| 711 | 5.7e-95 |
| WP_099925566.1 | D-aminoacyl-tRNA deacylase [Streptomyces mirabilis]
| 710 | 8.0e-95 |
| WP_101407999.1 | D-aminoacyl-tRNA deacylase [Streptomyces sp. GbtcB7]
| 710 | 8.3e-95 |
| GHD57701.1 | D-aminoacyl-tRNA deacylase [Streptomyces mirabilis]
| 711 | 9.5e-95 |
| WP_190083715.1 | D-aminoacyl-tRNA deacylase [Streptomyces longisporoflavus]
| 708 | 1.8e-94 |
| SOE28737.1 | D-tyrosyl-tRNA(Tyr) deacylase [Streptomyces sp. OK228]
| 708 | 2.4e-94 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1916 | Seems to have no N-terminal signal seq.
|