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IDSAVERM_4123 TypeCDS
From5059710 nt length2244
To5057467 aa length747
Gene pI9.85
Definitionputative ATP-dependent RNA helicase M.W (Da)81948
NotePF00270: DEAD/DEAH box helicase AseI frg.H
SignalP v.4.0Non-secretory protein | plot CategoryRNA modification


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4096 ATP-dependent RNA helicase8570.0e+00
sgrSGR_3892 putative ATP-dependent RNA helicase9400.0e+00
samSAM23877_3583 ATP-dependent RNA helicase8540.0e+00
scabSCAB47991 putative ATP-dependent RNA helicase10350.0e+00
paerPA0428 [gene=PA0428] [prot=probable ATP-dependent RNA helicase] [comment=PA0428]2772.9e-75

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DEAD1DEAD/DEAH box helicase76-243148.81.2e-43

Helicase_C1Helicase conserved C-terminal domain288-38681.74.2e-23

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
QFZ75514.1 DEAD/DEAH box helicase [Streptomyces fagopyri] 22330.0e+00
GAX54323.1 RNA helicase [Streptomyces olivochromogenes] 21740.0e+00
WP_194280631.1 DEAD/DEAH box helicase [Streptomyces fagopyri] 21700.0e+00
WP_148009149.1 DEAD/DEAH box helicase [Streptomyces sp. me109] >lcl 21640.0e+00
QDN99320.1 DEAD/DEAH ... 21570.0e+00
QDN58625.1 DEAD/DEAH box helicase [Streptomyces sp. S1D4-20] >gb 21570.0e+00
PBC97919.1 superfamily II DNA/RNA helicase [Streptomyces sp. Ag82_O1-15] 21490.0e+00
WP_189187304.1 DEAD/DEAH box helicase [Streptomyces albiflavescens] 21450.0e+00
SOE72629.1 Superfamily II DNA and RNA helicase [Streptomyces sp. OV198] 21360.0e+00
WP_081218191.1 DEAD/DEAH box helicase [Streptomyces sp. M41(2017)] >gb 21350.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.2904 Seems to have no N-terminal signal seq.