| ID | SAVERM_4125
| Type | CDS
|
| From | 5061188
| nt length | 351
|
| To | 5060838
| aa length | 116
|
| Gene |
| pI | 4.02
|
| Definition | hypothetical protein
| M.W (Da) | 13238
|
| Note | PF06262: Domain of unknown function (DUF1025)
| AseI frg. | H
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4094 hypothetical protein | 196 | 2.0e-67
|
| sgr | SGR_3888 conserved hypothetical protein | 221 | 4.0e-77
|
| sam | SAM23877_3585 hypothetical protein | 198 | 6.0e-68
|
| scab | SCAB47971 hypothetical protein | 197 | 9.0e-68
|
| sace | SACE_0154 protein of unknown function DUF1025 | 132 | 3.0e-42
|
| nfar | nfa1380 hypothetical protein | 138 | 1.1e-34
|
| mtub | gi|15610972 hypothetical protein Rv3836 [Mycobacterium tuberculosis H37Rv] | 125 | 5.6e-31
|
| cglu | gi|19554084 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 105 | 7.5e-25
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Zincin_1 | 1 | Zincin-like metallopeptidase | 28-114 | 118.2 | 1.2e-34
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_199883269.1 | metallopeptidase family protein [Streptomyces sp. CB01580] >...
| 491 | 2.3e-62 |
| WP_199800681.1 | MULTISPECIES: metallopeptidase family protein [Streptomyces]
| 491 | 2.4e-62 |
| WP_054230272.1 | MULTISPECIES: metallopeptidase family protein [unclassified ...
| 489 | 3.8e-62 |
| WP_060901697.1 | metallopeptidase family protein [Streptomyces sp. WAC00263]
| 488 | 5.4e-62 |
| WP_187285606.1 | metallopeptidase family protein [Streptomyces sp. me109]
| 488 | 6.1e-62 |
| WP_030221363.1 | metallopeptidase family protein [Streptomyces exfoliatus]
| 486 | 1.3e-61 |
| SDM56725.1 | Predicted Zn-dependent protease, minimal metalloprotease (MMP)-l...
| 486 | 1.3e-61 |
| WP_030929660.1 | MULTISPECIES: metallopeptidase family protein [Streptomyces]
| 485 | 1.6e-61 |
| WP_041130346.1 | metallopeptidase family protein [Streptomyces vietnamensis] ...
| 485 | 1.8e-61 |
| WP_194280875.1 | MULTISPECIES: metallopeptidase family protein [Streptomyces]
| 485 | 1.9e-61 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3726 | Seems to have no N-terminal signal seq.
|