| ID | SAVERM_4135
| Type | CDS
|
| From | 5075464
| nt length | 1581
|
| To | 5073884
| aa length | 526
|
| Gene | purF
| pI | 5.07
|
| Definition | putative phosphoribosylpyrophosphate amidotransferase
| M.W (Da) | 56097
|
| Note | PF00310: Glutamine amidotransferases class-II
| AseI frg. | H
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of nucleotides & nucleic acids
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4086 amidophosphoribosyltransferase | 988 | 0.0e+00
|
| sgr | SGR_3877 putative phosphoribosylpyrophosphate amidotransferase | 964 | 0.0e+00
|
| sam | SAM23877_3593 Amidophosphoribosyltransferase | 976 | 0.0e+00
|
| scab | SCAB47851 putative phosphoribosylpyrophosphate amidotransferase | 969 | 0.0e+00
|
| sace | SACE_7125 amidophosphoribosyltransferase | 703 | 0.0e+00
|
| nfar | nfa5790 purF phosphoribosylpyrophosphate amidotransferase | 665 | 0.0e+00
|
| mtub | gi|15607948 amidophosphoribosyltransferase [Mycobacterium tuberculosis H37Rv] | 649 | 0.0e+00
|
| cglu | gi|19553780 COG0034:Glutamine phosphoribosylpyrophosphate amidotransferase [Corynebacterium glutamicum] | 624 | 4.3e-180
|
| bsub | BG10707 purF, purB; phosphoribosylpyrophosphate amidotransferase [EC:2.4.2.14] | 416 | 1.7e-117
|
| ecoli | gi|16130247 amidophosphoribosyltransferase [Escherichia coli K12] | 279 | 2.8e-76
|
| paer | PA3108 [gene=purF] [prot=amidophosphoribosyltransferase] [comment=PA3108] | 281 | 1.3e-76
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| GATase_6 | 1 | Glutamine amidotransferase domain | 103-245 | 56.0 | 4.3e-15
|
| GATase_7 | 1 | Glutamine amidotransferase domain | 121-249 | 51.1 | 1.1e-13
|
| Pribosyltran | 1 | Phosphoribosyl transferase domain | 319-421 | 30.4 | 2.2e-07
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
|
| 2558 | 0.0e+00 |
| GGY30364.1 | amidophosphoribosyltransferase [Streptomyces djakartensis]
| 2557 | 0.0e+00 |
| GGT60037.1 | amidophosphoribosyltransferase [Streptomyces phaeofaciens]
| 2555 | 0.0e+00 |
| EFL33212.1 | amidophosphoribosyltransferase [Streptomyces viridochromogenes DS...
| 2554 | 0.0e+00 |
| GHI61963.1 | amidophosphoribosyltransferase [Streptomyces asoensis]
| 2550 | 0.0e+00 |
| PSK52520.1 | Amidophosphoribosyltransferase [Streptomyces sp. 111WW2]
| 2549 | 0.0e+00 |
| GGQ75483.1 | amidophosphoribosyltransferase [Streptomyces asoensis]
| 2549 | 0.0e+00 |
| WP_202415423.1 | MULTISPECIES: amidophosphoribosyltransferase [unclassified S...
| 2549 | 0.0e+00 |
| WP_228752012.1 | amidophosphoribosyltransferase [Streptomyces pseudogriseolus...
| 2548 | 0.0e+00 |
| WP_234490549.1 | amidophosphoribosyltransferase [Streptomyces sp. MBT33]
| 2548 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1450 | Seems to have no N-terminal signal seq.
|