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IDSAVERM_4155 TypeCDS
From5103407 nt length1509
To5104915 aa length502
Gene pI11.84
Definitionputative ATP-dependent RNA helicase M.W (Da)53331
NotePF00270: DEAD/DEAH box helicase AseI frg.H
SignalP v.4.0Non-secretory protein | plot CategoryRNA modification


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO5920 undefined product8030.0e+00
sgrSGR_3511 putative ATP-dependent RNA helicase7190.0e+00
samSAM23877_7553 putative DEAD-box RNA helicase7970.0e+00
scabSCAB87601 putative ATP-dependent RNA helicase7970.0e+00

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DEAD1DEAD/DEAH box helicase90-257146.94.6e-43

Helicase_C1Helicase conserved C-terminal domain300-40089.51.7e-25

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_100108199.1 DEAD/DEAH box helicase [Streptomyces peucetius] >gb 18900.0e+00
WP_177148264.1 DEAD/DEAH box helicase [Streptomyces sp. PKU-EA00015] >gb 18860.0e+00
WP_190093981.1 DEAD/DEAH box helicase [Streptomyces melanogenes] >dbj 18860.0e+00
WP_168480273.1 DEAD/DEAH box helicase [Streptomyces sp. RPA4-5] >gb 18820.0e+00
WP_053725376.1 DEAD/DEAH box helicase [Streptomyces sp. WM6378] 18820.0e+00
BCK71175.1 DEAD/DEAH box helicase [Streptomyces libani subsp. rufus] 18800.0e+00
WP_044363034.1 DEAD/DEAH box helicase [Streptomyces natalensis] >gb 18800.0e+00
WP_184985481.1 DEAD/DEAH box helicase [Streptomyces caelestis] >lcl 18800.0e+00
WP_093492599.1 DEAD/DEAH box helicase [Streptomyces sp. 2112.3] >emb 18790.0e+00
WP_190146198.1 DEAD/DEAH box helicase [Streptomyces glebosus] >dbj 18790.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.4494 Seems to have no N-terminal signal seq.