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IDSAVERM_42 TypeCDS
From51232 nt length1392
To52623 aa length463
Gene pI7.29
Definitionputative transcriptional regulator M.W (Da)48906
NotePF01381: Helix-turn-helix AseI frg.W
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO7724 hypothetical protein4021.0e-137
sgrSGR_482 hypothetical protein2055.0e-61
samSAM23877_7549 hypothetical protein3742.0e-126
scabSCAB50171 hypothetical protein3474.0e-117
nfarnfa28810 hypothetical protein902.1e-19

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain23-8634.41.9e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_217240176.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13381.5e-180
WP_030980555.1 transcriptional regulator [Streptomyces sp. NRRL S-1824] 13153.5e-177
WP_107450675.1 transcriptional regulator [Streptomyces sp. LUP30] 12834.0e-171
WP_151773501.1 helix-turn-helix domain-containing protein [Streptomyces aby... 12646.1e-170
GGY06100.1 transcriptional regulator [Streptomyces minutiscleroticus] 12708.2e-170
WP_229919739.1 helix-turn-helix domain-containing protein [Streptomyces min... 12644.1e-169
WP_027757915.1 transcriptional regulator [Streptomyces sp. Amel2xE9] >gb 12263.6e-163
MYS42246.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID5... 12254.6e-163
WP_109002257.1 transcriptional regulator [Streptomyces rishiriensis] 12314.9e-163
NED33849.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID8... 12161.6e-161

PSORT result

LocalizationCertaintyPSORT said
membrane0.1489 Seems to have no N-terminal signal seq.