| ID | SAVERM_4226
| Type | CDS
|
| From | 5181331
| nt length | 966
|
| To | 5182296
| aa length | 321
|
| Gene |
| pI | 5.01
|
| Definition | hypothetical protein
| M.W (Da) | 34266
|
| Note | PF02810: SEC-C motif
| AseI frg. | H
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3974 hypothetical protein | 570 | 0.0e+00
|
| sgr | SGR_3617 conserved hypothetical protein | 553 | 0.0e+00
|
| sam | SAM23877_3689 hypothetical protein | 583 | 0.0e+00
|
| scab | SCAB46771 hypothetical protein | 561 | 0.0e+00
|
| sace | SACE_0127 hypothetical protein | 257 | 3.0e-85
|
| nfar | nfa1260 hypothetical protein | 216 | 2.8e-57
|
| cglu | gi|19554094 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 167 | 6.1e-43
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| SEC-C | 1 | SEC-C motif | 27-43 | 33.1 | 3.6e-08
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.0937 | Seems to have no N-terminal signal seq.
|