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IDSAVERM_4257 TypeCDS
From5220092 nt length1707
To5218386 aa length568
Gene pI5.21
Definitionputative two-component system sensor kinase M.W (Da)60296
NotePF01590: GAF domain AseI frg.H
SignalP v.4.0Non-secretory protein | plot Categorysensors


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO3948 putative two component sensor7870.0e+00
sgrSGR_3643 putative two-component system sensor kinase7900.0e+00
samSAM23877_3716 Hypoxia sensor histidine kinase response regulator DosT7570.0e+00
scabSCAB10621 putative two-component system sensor kinase3977.0e-133
saceSACE_0145 two-component system sensor kinase1711.0e-48
nfarnfa28940 two-component system sensor kinase3618.1e-101
mtubgi|15609164 Probable histidine kinase response regulator [Mycobacterium tuberculosis H37Rv]3571.2e-99

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GAF_22GAF domain46-185, 216-349120.36.7e-35

GAF2GAF domain47-185, 216-34990.31.5e-25

GAF_31GAF domain216-34960.61.8e-16

HisKA_31Histidine kinase367-42843.62.9e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_237529464.1 GAF domain-containing protein [Streptomyces sp. SID5469] 26110.0e+00
WP_099501986.1 MULTISPECIES: GAF domain-containing protein [Streptomyces] >... 21500.0e+00
WP_030609037.1 GAF domain-containing protein [Streptomyces fulvoviolaceus] 21350.0e+00
WP_164301538.1 GAF domain-containing protein [Streptomyces sp. SID14478] >g... 21320.0e+00
WP_043243622.1 MULTISPECIES: GAF domain-containing protein [unclassified St... 21260.0e+00
WP_109497103.1 GAF domain-containing protein [Streptomyces sp. Act143] >gb 21140.0e+00
WP_116512124.1 GAF domain-containing protein [Streptomyces sp. AcE210] >gb 21080.0e+00
WP_207828121.1 GAF domain-containing protein [Streptomyces sp. VRA16 Mangro... 21060.0e+00
WP_190174475.1 GAF domain-containing protein [Streptomyces mirabilis] 21060.0e+00
GHD78957.1 histidine kinase [Streptomyces mirabilis] 21040.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.5292 Seems to have no N-terminal signal seq.