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IDSAVERM_4258 TypeCDS
From5223721 nt length3555
To5220167 aa length1184
GenecydCD pI8.84
Definitionputative ABC transporter ATP-binding protein M.W (Da)124343
NotePF00005: ABC transporter AseI frg.H
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO3947 putative ABC transporter16850.0e+00
sgrSGR_3644 putative ABC transporter ATP-binding protein and permease component14760.0e+00
samSAM23877_3717 Transport ATP-binding protein CydCD16750.0e+00
scabSCAB46421 putative ABC transporter ATP-binding protein16030.0e+00
saceSACE_0144 putative ABC transporter ATP-binding protein3273.0e-95
nfarnfa5870 ABC transporter ATP-binding protein3943.3e-110
mtubgi|15608759 PROBABLE 'COMPONENT LINKED WITH THE ASSEMBLY OF CYTOCHROME' TRANSPORT TRANSMEMBRANE ATP-BINDING PROTEIN ABC TRANSPORTER CYDD [Mycobacterium tuberculosis H37Rv]3633.6e-101
cglugi|19552372 COG1132:ABC-type multidrug/protein/lipid transport system, ATPase component [Corynebacterium glutamicum]2981.3e-81
bsubBG11927 cydC, yxkM; multidrug resistance protein3302.3e-91
ecoligi|16128854 ATP-binding component of cytochrome-related transport, Zn sensitive [Escherichia coli K12]3588.9e-100

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran2ABC transporter350-498, 954-1101208.54.6e-62

ABC_membrane2ABC transporter transmembrane region21-282, 659-872135.62.3e-39

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202498232.1 thiol reductant ABC exporter subunit CydD [Streptomyces sp. ... 39130.0e+00
WP_075031514.1 thiol reductant ABC exporter subunit CydD [Streptomyces mira... 33520.0e+00
WP_097227539.1 thiol reductant ABC exporter subunit CydD [Streptomyces sp. ... 33480.0e+00
WP_217569793.1 thiol reductant ABC exporter subunit CydD [Streptomyces sp. ... 33450.0e+00
SFG23266.1 ATP-binding cassette, subfamily C, CydCD [Streptomyces mirabilis... 33440.0e+00
SOE72184.1 ATP-binding cassette, subfamily C, CydCD [Streptomyces sp. OV198... 33430.0e+00
WP_190174474.1 thiol reductant ABC exporter subunit CydD [Streptomyces mira... 33410.0e+00
WP_071366827.1 thiol reductant ABC exporter subunit CydD [Streptomyces colo... 33320.0e+00
WP_181650749.1 thiol reductant ABC exporter subunit CydD [Streptomyces sp. ... 33210.0e+00
WP_143627247.1 MULTISPECIES: thiol reductant ABC exporter subunit CydD [unc... 33110.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.4439 Seems to have a cleavable N-term signal seq.