| ID | SAVERM_4300
| Type | CDS
|
| From | 5268648
| nt length | 2418
|
| To | 5271065
| aa length | 805
|
| Gene |
| pI | 4.55
|
| Definition | putative membrane protein
| M.W (Da) | 84760
|
| Note |
| AseI frg. | H
|
| SignalP v.4.0 | Signal peptide | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3895 hypothetical protein | 1003 | 0.0e+00
|
| sgr | SGR_3684 conserved hypothetical protein | 911 | 0.0e+00
|
| sam | SAM23877_3762 conserved exported protein of unknown function | 1048 | 0.0e+00
|
| scab | SCAB45981 putative membrane protein | 1112 | 0.0e+00
|
| sace | SACE_7379 possible glycoprotein | 120 | 1.0e-28
|
| nfar | nfa56580 hypothetical protein | 120 | 6.1e-28
|
| mtub | gi|15611045 hypothetical protein Rv3909 [Mycobacterium tuberculosis H37Rv] | 107 | 3.1e-24
|
| cglu | gi|19554277 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 89 | 6.1e-19
|
| bsub | BG11941 gbsB; alcohol dehydrogenase [EC:1.1.1.1] | 31 | 1.9e-01
|
| paer | PA4321 [gene=PA4321] [prot=hypothetical protein] [comment=PA4321] | 33 | 7.8e-02
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; paer, Pseudomonas aeruginosa;
Pfam search result
no hits.
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.5352 | Seems to have no N-terminal signal seq.
|