| ID | SAVERM_4306
| Type | CDS
|
| From | 5278082
| nt length | 333
|
| To | 5278414
| aa length | 110
|
| Gene | trxA1
| pI | 4.28
|
| Definition | putative thioredoxin
| M.W (Da) | 11871
|
| Note | PF00085: Thioredoxin
| AseI frg. | H
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | membrane bioenergetics
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3889 thioredoxin | 219 | 1.0e-76
|
| sgr | SGR_3690 putative thioredoxin | 199 | 7.0e-69
|
| sam | SAM23877_3768 thioredoxin 1 | 218 | 4.0e-76
|
| scab | SCAB45921 putative thioredoxin | 218 | 4.0e-76
|
| sace | SACE_7385 thioredoxin reductase | 142 | 3.0e-46
|
| nfar | nfa56630 thioredoxin | 127 | 2.8e-31
|
| mtub | gi|15611050 THIOREDOXIN TRXC (TRX) (MPT46) [Mycobacterium tuberculosis H37Rv] | 121 | 9.5e-30
|
| cglu | gi|19554281 COG0526:Thiol-disulfide isomerase and thioredoxins [Corynebacterium glutamicum] | 102 | 4.3e-24
|
| bsub | BG10348 trxA, trx; thioredoxin | 110 | 1.5e-26
|
| ecoli | gi|67005950 thioredoxin [Escherichia coli K12] | 126 | 3.8e-31
|
| paer | PA5240 [gene=trxA] [prot=thioredoxin] [comment=PA5240] | 120 | 2.7e-29
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Thioredoxin | 1 | Thioredoxin | 6-105 | 112.7 | 6.2e-33
|
| Thioredoxin_8 | 1 | Thioredoxin-like | 22-64 | 39.8 | 4.1e-10
|
| Thioredoxin_2 | 1 | Thioredoxin-like domain | 19-99 | 31.2 | 2.1e-07
|
| AhpC-TSA | 1 | AhpC/TSA family | 5-63 | 26.9 | 3.4e-06
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2689 | Seems to have no N-terminal signal seq.
|