| ID | SAVERM_4310
| Type | CDS
|
| From | 5282716
| nt length | 741
|
| To | 5281976
| aa length | 246
|
| Gene | rsmG
| pI | 8.24
|
| Definition | 16S ribosomal RNA small subunit methyltransferase
| M.W (Da) | 26517
|
| Note | gidB, PF02527: Glucose inhibited division protein
| AseI frg. | H
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | RNA modification
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3885 hypothetical protein | 407 | 8.0e-147
|
| sgr | SGR_3694 putative glucose-inhibited division protein B | 386 | 3.0e-138
|
| sam | SAM23877_3773 Ribosomal RNA small subunit methyltransferase G | 409 | 2.0e-147
|
| scab | SCAB45881 putative 16S ribosomal RNA small subunit methyltransferase | 409 | 1.0e-147
|
| sace | SACE_7392 putative glucose inhibited division protein B | 112 | 1.0e-31
|
| nfar | nfa56680 gidB glucose inhibited division protein B | 225 | 2.4e-60
|
| mtub | gi|15611055 glucose-inhibited division protein B [Mycobacterium tuberculosis H37Rv] | 193 | 1.0e-50
|
| cglu | gi|19554286 COG0357:Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division [Corynebacterium glutamicum] | 214 | 3.1e-57
|
| bsub | BG10058 gidB; glucose inhibited division protein B | 82 | 2.3e-17
|
| ecoli | gi|16131608 glucose-inhibited division protein B [Escherichia coli K12] | 83 | 1.5e-17
|
| paer | PA5564 [gene=gidB] [prot=glucose inhibited division protein B] [comment=PA5564] | 71 | 6.2e-14
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| GidB | 1 | rRNA small subunit methyltransferase G | 32-206 | 188.3 | 7.3e-56
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202035634.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG [Strepto...
| 1011 | 2.3e-137 |
| KOU54950.1 | 16S rRNA methyltransferase [Streptomyces sp. MMG1533]
| 1008 | 9.3e-137 |
| WP_189708759.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG [Strepto...
| 1004 | 2.0e-136 |
| WP_126393497.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG [Strepto...
| 1003 | 2.2e-136 |
| KOV52147.1 | 16S rRNA methyltransferase [Streptomyces sp. AS58]
| 1004 | 2.8e-136 |
| WP_016437040.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG [Strepto...
| 1002 | 3.1e-136 |
| WP_206345607.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG [Strepto...
| 1003 | 3.5e-136 |
| WP_211179031.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG [Strepto...
| 1003 | 3.9e-136 |
| WP_203634489.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG [Strepto...
| 1002 | 4.4e-136 |
| WP_234516298.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG [Strepto...
| 1001 | 5.7e-136 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3484 | Seems to have no N-terminal signal seq.
|