| ID | SAVERM_4339
| Type | CDS
|
| From | 5317053
| nt length | 1485
|
| To | 5315569
| aa length | 494
|
| Gene | pbp6
| pI | 9.34
|
| Definition | putative penicillin-binding protein, secreted
| M.W (Da) | 52945
|
| Note | PF00905: Penicillin binding protein transpeptidase domain
| AseI frg. | H
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | cell wall
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3847 putative penicillin-binding protein | 797 | 0.0e+00
|
| sgr | SGR_3726 penicillin-binding protein | 703 | 0.0e+00
|
| sam | SAM23877_3809 Penicillin-binding protein A | 791 | 0.0e+00
|
| scab | SCAB45551 putative penicillin-binding protein, secreted | 666 | 0.0e+00
|
| sace | SACE_0046 peptidoglycan glycosyltransferase | 363 | 5.0e-122
|
| nfar | nfa820 penicillin-binding protein | 332 | 5.9e-92
|
| mtub | gi|15607158 PROBABLE PENICILLIN-BINDING PROTEIN PBPA [Mycobacterium tuberculosis H37Rv] | 311 | 4.8e-86
|
| cglu | gi|19551293 COG0768:Cell division protein FtsI/penicillin-binding protein 2 [Corynebacterium glutamicum] | 270 | 8.6e-74
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Transpeptidase | 1 | Penicillin binding protein transpeptidase domain | 160-487 | 229.2 | 6.2e-68
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| outside | 0.3000 | Seems to have a cleavable N-term signal seq.
|