| ID | SAVERM_4342
| Type | CDS
|
| From | 5320717
| nt length | 528
|
| To | 5320190
| aa length | 175
|
| Gene |
| pI | 11.65
|
| Definition | putative membrane protein
| M.W (Da) | 19068
|
| Note | PF00498: FHA domain
| AseI frg. | H
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3844 hypothetical protein | 273 | 7.0e-96
|
| sgr | SGR_3729 conserved hypothetical protein | 258 | 5.0e-90
|
| sam | SAM23877_3812 FHA domain-containing protein FhaB | 280 | 1.0e-98
|
| scab | SCAB45481 hypothetical protein | 266 | 5.0e-93
|
| sace | SACE_0049 FHA domain containing protein | 156 | 6.0e-50
|
| nfar | nfa850 hypothetical protein | 138 | 2.3e-34
|
| mtub | gi|15607161 hypothetical protein Rv0019c [Mycobacterium tuberculosis H37Rv] | 133 | 5.8e-33
|
| cglu | gi|19551296 COG1716:FHA-domain-containing proteins [Corynebacterium glutamicum] | 103 | 6.0e-24
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| FHA | 1 | FHA domain | 102-167 | 61.1 | 9e-17
|
| Yop-YscD_cpl | 1 | Inner membrane component of T3SS, cytoplasmic domain | 87-174 | 58.2 | 7.2e-16
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_189187102.1 | FHA domain-containing protein [Streptomyces albiflavescens] ...
| 724 | 5.9e-96 |
| WP_040251112.1 | MULTISPECIES: FHA domain-containing protein [Streptomyces] >...
| 720 | 2.0e-95 |
| WP_071366645.1 | FHA domain-containing protein [Streptomyces colonosanans] >g...
| 720 | 2.4e-95 |
| WP_023540225.1 | MULTISPECIES: FHA domain-containing protein [Streptomyces] >...
| 719 | 2.9e-95 |
| WP_189981699.1 | FHA domain-containing protein [Streptomyces termitum] >dbj
| 719 | 3.2e-95 |
| WP_059132303.1 | MULTISPECIES: FHA domain-containing protein [unclassified St...
| 718 | 4.1e-95 |
| WP_055493924.1 | FHA domain-containing protein [Streptomyces sp. TP-A0356]
| 717 | 5.0e-95 |
| WP_108150307.1 | FHA domain-containing protein [Streptomyces lunaelactis] >gb...
| 717 | 5.0e-95 |
| WP_107017882.1 | MULTISPECIES: FHA domain-containing protein [Streptomyces] >...
| 717 | 6.4e-95 |
| WP_168529076.1 | FHA domain-containing protein [Streptomyces sp. RPA4-2] >gb
| 717 | 7.1e-95 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.5012 | Seems to have an uncleavable N-term signal seq
|