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IDSAVERM_4361 TypeCDS
From5339495 nt length408
To5339088 aa length135
Gene pI6.97
Definitionputative AsnC-family transcriptional regulator M.W (Da)14963
NotePF01037: AsnC family AseI frg.H
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO3832 putative transcriptional regulator2532.0e-89
sgrSGR_3747 putative AsnC-family transcriptional regulator2219.0e-77
samSAM23877_3825 Transcriptional regulator2514.0e-88
scabSCAB45321 putative AsnC-family transcriptional regulator2451.0e-85
saceSACE_3951 transcriptional regulator, AsnC family1368.0e-43

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AsnC_trans_reg1Lrp/AsnC ligand binding domain63-12845.55e-12

HTH_241Winged helix-turn-helix DNA-binding2-3835.26e-09

HTH_AsnC-type1AsnC-type helix-turn-helix domain2-3129.93.2e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_095935488.1 Lrp/AsnC family transcriptional regulator [Streptomyces sp. ... 6058.2e-79
WP_028799341.1 Lrp/AsnC family transcriptional regulator [Streptomyces sp. ... 6058.5e-79
WP_099502102.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 6031.5e-78
WP_211118035.1 Lrp/AsnC family transcriptional regulator [Streptomyces sp. ... 6041.7e-78
QIY67468.1 Lrp/AsnC family transcriptional regulator [Streptomyces sp. RPA4-... 6031.9e-78
GGN65906.1 transcriptional regulator [Streptomyces albiflavescens] 6031.9e-78
WP_060901628.1 Lrp/AsnC family transcriptional regulator [Streptomyces sp. ... 6022.3e-78
WP_189187360.1 Lrp/AsnC family transcriptional regulator [Streptomyces albi... 6022.5e-78
WP_054234202.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 6022.7e-78
KPI06569.1 transcriptional regulator, AsnC family [Actinobacteria bacterium ... 6022.8e-78

PSORT result

LocalizationCertaintyPSORT said
membrane0.1001 Seems to have no N-terminal signal seq.