| ID | SAVERM_4375
| Type | CDS
|
| From | 5355890
| nt length | 660
|
| To | 5355231
| aa length | 219
|
| Gene |
| pI | 4.82
|
| Definition | putative two-component system response regulator
| M.W (Da) | 23683
|
| Note | PF00072: Response regulator receiver domain
| AseI frg. | H
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | regulation
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3818 putative two-component system response transcriptional regulator | 363 | 4.0e-130
|
| sgr | SGR_3764 putative two-component system response regulator | 378 | 5.0e-136
|
| sam | SAM23877_3840 Transcriptional regulatory protein DevR (DosR) (modular protein) | 370 | 1.0e-131
|
| scab | SCAB4181 putative two-component system response regulator | 270 | 5.0e-93
|
| sace | SACE_0148 two-component system response regulator | 257 | 2.0e-88
|
| nfar | nfa19100 two-component system response regulator | 243 | 9.5e-66
|
| mtub | gi|15610269 TWO COMPONENT TRANSCRIPTIONAL REGULATORY PROTEIN DEVR (PROBABLY LUXR/UHPA-FAMILY) [Mycobacterium tuberculosis H37Rv] | 253 | 9.4e-69
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Response_reg | 1 | Response regulator receiver domain | 9-121 | 90.0 | 1e-25
|
| GerE | 1 | Bacterial regulatory proteins, luxR family | 156-210 | 54.6 | 5.3e-15
|
| Sigma70_r4_2 | 1 | Sigma-70, region 4 | 152-194 | 28.4 | 8.7e-07
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202498254.1 | response regulator transcription factor [Streptomyces sp. SI...
| 1107 | 8.2e-153 |
| AYG81809.1 | Transcriptional regulatory protein DevR (DosR) [Streptomyces hund...
| 1003 | 4.8e-137 |
| WP_223733295.1 | response regulator transcription factor [Streptomyces purpur...
| 1000 | 1.2e-136 |
| WP_030259264.1 | response regulator transcription factor [Streptomyces violen...
| 997 | 3.3e-136 |
| WP_174248586.1 | response regulator transcription factor [Streptomyces hundun...
| 997 | 4.1e-136 |
| MYV96025.1 | response regulator [Streptomyces sp. SID1034] >gb
| 996 | 5.2e-136 |
| WP_215065112.1 | response regulator transcription factor [Streptomyces sp. IS...
| 995 | 6.8e-136 |
| WP_127827597.1 | response regulator transcription factor [Streptomyces sp. Sa...
| 995 | 8.2e-136 |
| WP_189187074.1 | response regulator transcription factor [Streptomyces albifl...
| 995 | 1.1e-135 |
|
| 994 | 1.3e-135 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1060 | Seems to have no N-terminal signal seq.
|