| ID | SAVERM_4390
| Type | CDS
|
| From | 5371721
| nt length | 1827
|
| To | 5369895
| aa length | 608
|
| Gene | fadE24
| pI | 4.71
|
| Definition | putative acyl-CoA dehydrogenase
| M.W (Da) | 66461
|
| Note | PF00441: Acyl-CoA dehydrogenase, C-terminal domain
| AseI frg. | H
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of lipids
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3800 putative acyl-CoA dehydrogenase | 1158 | 0.0e+00
|
| sgr | SGR_3785 putative acyl-CoA dehydrogenase | 1087 | 0.0e+00
|
| sam | SAM23877_3855 putative acyl-CoA dehydrogenase | 1161 | 0.0e+00
|
| scab | SCAB45061 putative acyl-CoA dehydrogenase | 1151 | 0.0e+00
|
| sace | SACE_7242 acyl-CoA dehydrogenase | 773 | 0.0e+00
|
| nfar | nfa54510 fadE49 acyl-CoA dehydrogenase | 750 | 0.0e+00
|
| mtub | gi|15607385 PROBABLE ACYL-CoA DEHYDROGENASE FADE5 [Mycobacterium tuberculosis H37Rv] | 736 | 0.0e+00
|
| paer | PA0506 [gene=PA0506] [prot=probable acyl-CoA dehydrogenase] [comment=PA0506] | 312 | 4.9e-86
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Acyl-CoA_dh_C | 1 | Acetyl-CoA dehydrogenase C-terminal like | 471-604 | 102.9 | 1.2e-29
|
| Acyl-CoA_dh_M | 1 | Acyl-CoA dehydrogenase, middle domain | 162-272 | 65.3 | 4.2e-18
|
| Acyl-CoA_dh_1 | 1 | Acyl-CoA dehydrogenase, C-terminal domain | 286-452 | 57.0 | 2.2e-15
|
| AcylCoA_DH_N | 1 | Acyl-CoA dehydrogenase N terminal | 3-34 | 44.1 | 1.4e-11
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2011 | Seems to have no N-terminal signal seq.
|