| ID | SAVERM_4403
| Type | CDS
|
| From | 5385523
| nt length | 1725
|
| To | 5383799
| aa length | 574
|
| Gene | metS
| pI | 4.75
|
| Definition | putative methionyl-tRNA synthetase
| M.W (Da) | 64971
|
| Note | PF00133: tRNA synthetases class I (I, L, M and V)
| AseI frg. | H
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | aminoacyl-tRNA-synthetase
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3792 putative methionyl tRNA synthetase | 158 | 1.0e-42
|
| sgr | SGR_3792 putative methionyl tRNA synthetase | 169 | 2.0e-46
|
| sam | SAM23877_3866 Methionine--tRNA ligase | 159 | 4.0e-43
|
| scab | SCAB44841 putative methionyl-tRNA synthetase | 1058 | 0.0e+00
|
| sace | SACE_0799 methionyl-tRNA synthetase | 323 | 7.0e-104
|
| nfar | nfa49060 metS methionyl-tRNA synthetase | 150 | 3.8e-37
|
| mtub | gi|15608147 methionine--tRNA ligase [Mycobacterium tuberculosis H37Rv] | 137 | 1.9e-33
|
| cglu | gi|19552118 COG0143:Methionyl-tRNA synthetase [Corynebacterium glutamicum] | 315 | 2.8e-87
|
| bsub | BG10101 metS; methionyl-tRNA synthetase [EC:6.1.1.10] | 152 | 3.9e-38
|
| ecoli | gi|16130052 methionyl-tRNA synthetase [Escherichia coli K12] | 268 | 7.2e-73
|
| paer | PA3482 [gene=metG] [prot=methionyl-tRNA synthetase] [comment=PA3482] | 223 | 2.8e-59
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| tRNA-synt_1g | 1 | tRNA synthetases class I (M) | 4-409 | 524.3 | 1.5e-157
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1053 | Seems to have no N-terminal signal seq.
|