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IDSAVERM_4426 TypeCDS
From5411599 nt length762
To5410838 aa length253
Gene pI9.32
Definitionhypothetical protein M.W (Da)26582
NotePF03734: ErfK/YbiS/YcfS/YnhG AseI frg.H
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
scabSCAB44611 hypothetical protein3207.0e-111

*scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

YkuD1L,D-transpeptidase catalytic domain105-22350.03.7e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
GHD68505.1 hypothetical protein GCM10010317_072870 [Streptomyces mirabilis] 8305.6e-109
WP_095853581.1 L,D-transpeptidase [Streptomyces sp. Ag82_O1-15] >gb 8247.8e-108
WP_143608755.1 MULTISPECIES: L,D-transpeptidase [unclassified Streptomyces]... 8212.2e-107
WP_067381616.1 L,D-transpeptidase [Streptomyces olivochromogenes] >gb 8194.2e-107
SOE71690.1 Lipoprotein-anchoring transpeptidase ErfK/SrfK [Streptomyces sp.... 8151.1e-106
WP_099921611.1 L,D-transpeptidase [Streptomyces sp. GbtcB7] 8133.2e-106
WP_181650648.1 L,D-transpeptidase [Streptomyces sp. WAC00263] >lcl 8081.7e-105
WP_075031692.1 L,D-transpeptidase [Streptomyces mirabilis] >emb 8081.9e-105
WP_190172639.1 L,D-transpeptidase [Streptomyces mirabilis] 8073.2e-105
QIY97180.1 L,D-transpeptidase [Streptomyces sp. S1D4-11] 8055.5e-105

PSORT result

LocalizationCertaintyPSORT said
outside0.3000 Seems to have a cleavable N-term signal seq.