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IDSAVERM_4476 TypeCDS
From5467916 nt length1446
To5466471 aa length481
Gene pI3.8
Definitionputative integrin-like protein M.W (Da)47316
NotePF01839: FG-GAP repeat AseI frg.L
SignalP v.4.0Signal peptide | plot Categorytransport / binding proteins & lipoproteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

FG-GAP4FG-GAP repeat29-63, 96-134, 268-307, 342-365117.51.6e-34

VCBS1Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella104-17675.73e-21

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_119100685.1 FG-GAP-like repeat-containing protein [Streptomyces sporangi... 17120.0e+00
WP_200397264.1 FG-GAP-like repeat-containing protein [Streptomyces sp. ZYC-... 17050.0e+00
WP_189844039.1 FG-GAP-like repeat-containing protein [Streptomyces umbrinus... 16980.0e+00
WP_143640065.1 VCBS repeat-containing protein [Streptomyces sp. IB201691-2A... 16950.0e+00
WP_190230499.1 VCBS repeat-containing protein [Streptomyces umbrinus] >dbj 16950.0e+00
WP_055613087.1 VCBS repeat-containing protein [Streptomyces phaeochromogene... 16820.0e+00
WP_217454223.1 FG-GAP-like repeat-containing protein [Streptomyces sp. BV28... 16740.0e+00
WP_028799244.1 VCBS repeat-containing protein [Streptomyces sp. 142MFCol3.1... 14180.0e+00
WP_003991758.1 VCBS repeat-containing protein [Streptomyces viridochromogen... 13980.0e+00
KDN75496.1 integrin [Streptomyces olindensis] 13870.0e+00

PSORT result

LocalizationCertaintyPSORT said
outside0.3000 Seems to have a cleavable N-term signal seq.