| ID | SAVERM_4485
| Type | CDS
|
| From | 5480919
| nt length | 666
|
| To | 5481584
| aa length | 221
|
| Gene | grpE1
| pI | 4.26
|
| Definition | putative heat shock protein GrpE
| M.W (Da) | 23414
|
| Note | PF01025: GrpE
| AseI frg. | L
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | adaptation to atypical conditions
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3670 grpE heat chock protein | 371 | 5.0e-133
|
| sgr | SGR_3433 putative heat shock protein GrpE | 354 | 1.0e-126
|
| sam | SAM23877_3947 Protein GrpE | 369 | 2.0e-132
|
| scab | SCAB42531 putative heat shock protein GrpE | 358 | 8.0e-128
|
| sace | SACE_7209 heat shock protein (HSP-70 cofactor) | 148 | 2.0e-45
|
| nfar | nfa54080 grpE heat shock protein | 157 | 9.1e-40
|
| mtub | gi|15607492 PROBABLE GRPE PROTEIN (HSP-70 COFACTOR) [Mycobacterium tuberculosis H37Rv] | 119 | 1.3e-28
|
| cglu | gi|19553989 COG0576:Molecular chaperone GrpE (heat shock protein) [Corynebacterium glutamicum] | 123 | 6.2e-30
|
| bsub | BG10663 grpE; heat-shock protein (activation of DnaK) | 78 | 2.8e-16
|
| ecoli | gi|16130533 Hsp 24 nucleotide exchange factor [Escherichia coli K12] | 84 | 5.8e-18
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| GrpE | 1 | GrpE | 43-194 | 120.6 | 4.7e-35
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_130438714.1 | nucleotide exchange factor GrpE [Streptomyces sp. BK239] >gb...
| 856 | 1.2e-114 |
| WP_062673592.1 | MULTISPECIES: nucleotide exchange factor GrpE [Streptomyces]...
| 845 | 4.8e-113 |
| WP_030781898.1 | MULTISPECIES: nucleotide exchange factor GrpE [Streptomyces]...
| 844 | 9.7e-113 |
| WP_205069852.1 | nucleotide exchange factor GrpE [Streptomyces sp. S9] >lcl
| 843 | 1.1e-112 |
| WP_053751853.1 | nucleotide exchange factor GrpE [Streptomyces sp. MMG1533]
| 842 | 1.7e-112 |
| WP_147994771.1 | nucleotide exchange factor GrpE [Streptomyces sp. uw30] >lcl...
| 838 | 4.7e-112 |
| WP_210980559.1 | nucleotide exchange factor GrpE [Streptomyces sp. RK62] >lcl...
| 838 | 4.8e-112 |
| WP_189981911.1 | nucleotide exchange factor GrpE [Streptomyces capoamus] >dbj...
| 839 | 5.4e-112 |
| WP_210924104.1 | nucleotide exchange factor GrpE [Streptomyces sp. B93] >lcl
| 838 | 5.8e-112 |
| WP_189711207.1 | nucleotide exchange factor GrpE [Streptomyces phaeofaciens] ...
| 836 | 1.2e-111 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3725 | Seems to have no N-terminal signal seq.
|