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IDSAVERM_4509 TypeCDS
From5507102 nt length1731
To5508832 aa length576
GenetrsK pI8.05
Definitionputative conjugative transfer gene complex protein M.W (Da)61899
NotePF02534: TraG/TraD family AseI frg.L
SignalP v.4.0Non-secretory protein | plot Categoryplasmid transfer


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6849 putative membrane protein (fragment).3156.0e-101
samSAM23877_6500 putative membrane protein2621.0e-80
scabSCAB33161 putative conjugative transfer gene complex protein3122.0e-99
nfarnfa36680 hypothetical protein4786.1e-136
paerPA1867 [gene=PA1867] [prot=hypothetical protein] [comment=PA1867]329.2e-02

*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

TraG-D_C1TraM recognition site of TraD and TraG411-534102.41.5e-29

T4SS-DNA_transf1Type IV secretory system Conjugative DNA transfer153-56277.39.5e-22

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_037676822.1 type IV secretory system conjugative DNA transfer family pro... 22810.0e+00
WP_142265357.1 MULTISPECIES: type IV secretory system conjugative DNA trans... 22600.0e+00
WP_020129169.1 type IV secretory system conjugative DNA transfer family pro... 22520.0e+00
WP_069779648.1 type IV secretory system conjugative DNA transfer family pro... 22480.0e+00
WP_130438669.1 TraM recognition domain-containing protein [Streptomyces sp.... 22460.0e+00
WP_062645051.1 type IV secretory system conjugative DNA transfer family pro... 22350.0e+00
WP_109003395.1 type IV secretory system conjugative DNA transfer family pro... 22340.0e+00
OQR63751.1 conjugal transfer protein [Streptomyces sp. B9173] 22320.0e+00
WP_079660921.1 TraM recognition domain-containing protein [Streptomyces sp.... 22260.0e+00
WP_037702800.1 type IV secretory system conjugative DNA transfer family pro... 22140.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.2466 Seems to have a cleavable N-term signal seq.