| ID | SAVERM_4606
| Type | CDS
|
| From | 5624790
| nt length | 1302
|
| To | 5626091
| aa length | 433
|
| Gene |
| pI | 6.97
|
| Definition | hypothetical protein
| M.W (Da) | 44742
|
| Note | PF00437: Type II/IV secretion system protein
| AseI frg. | L
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3556 putative secretory protein | 640 | 0.0e+00
|
| sgr | SGR_3320 putative Type II/IV secretory protein | 584 | 0.0e+00
|
| sam | SAM23877_4110 hypothetical protein | 629 | 0.0e+00
|
| scab | SCAB41161 hypothetical protein | 637 | 0.0e+00
|
| sace | SACE_0367 type II secretion system protein E | 342 | 3.0e-116
|
| nfar | nfa3590 hypothetical protein | 404 | 8.0e-114
|
| mtub | gi|57117141 hypothetical protein Rv3659c [Mycobacterium tuberculosis H37Rv] | 381 | 5.5e-107
|
| cglu | gi|19551551 COG0630:Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis [Corynebacterium glutamicum] | 334 | 5.4e-93
|
| ecoli | gi|16130851 putative protein transport [Escherichia coli K12] | 58 | 8.1e-10
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| T2SSE | 1 | Type II/IV secretion system protein | 104-379 | 262.6 | 2.8e-78
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| MYT00200.1 | TadA family conjugal transfer-associated ATPase [Streptomyces sp....
| 1445 | 0.0e+00 |
| AVH61260.1 | secretion protein [Streptomyces dengpaensis] >gb
| 1369 | 0.0e+00 |
| WP_143627512.1 | MULTISPECIES: TadA family conjugal transfer-associated ATPas...
| 1367 | 0.0e+00 |
| WP_180289344.1 | MULTISPECIES: TadA family conjugal transfer-associated ATPas...
| 1362 | 0.0e+00 |
| WP_168494148.1 | TadA family conjugal transfer-associated ATPase [Streptomyce...
| 1360 | 0.0e+00 |
| WP_067373851.1 | TadA family conjugal transfer-associated ATPase [Streptomyce...
| 1358 | 0.0e+00 |
| WP_143608836.1 | MULTISPECIES: TadA family conjugal transfer-associated ATPas...
| 1358 | 0.0e+00 |
| WP_212727162.1 | TadA family conjugal transfer-associated ATPase [Streptomyce...
| 1357 | 0.0e+00 |
| WP_143602467.1 | MULTISPECIES: TadA family conjugal transfer-associated ATPas...
| 1357 | 0.0e+00 |
| WP_097285647.1 | TadA family conjugal transfer-associated ATPase [Streptomyce...
| 1356 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1086 | Seems to have no N-terminal signal seq.
|