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IDSAVERM_4635 TypeCDS
From5659480 nt length3414
To5662893 aa length1137
Gene pI6.18
Definitionputative transcriptional regulator M.W (Da)119684
Notesimilar to AfsR, PF03704: Bacterial transcriptional activator domain AseI frg.R
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
scabSCAB40101 putative transcriptional regulator7930.0e+00
mtubgi|15608407 PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN EMBR [Mycobacterium tuberculosis H37Rv]1429.7e-35

*scab, Streptomyces scabies 87.22; mtub, Mycobacterium tuberculosis H37Rv;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BTAD1Bacterial transcriptional activator domain136-283143.27.1e-42

TPR_121Tetratricopeptide repeat921-98963.91.1e-17

Trans_reg_C1Transcriptional regulatory protein, C terminal63-12339.44.4e-10

TPR_82Tetratricopeptide repeat922-950, 999-102737.71.1e-09

NB-ARC1NB-ARC domain391-57936.91.8e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_229703414.1 AfsR/SARP family transcriptional regulator [Streptomyces alb... 17600.0e+00
WP_234512113.1 tetratricopeptide repeat protein [Streptomyces glomeratus] >... 17450.0e+00
WP_028799103.1 tetratricopeptide repeat protein [Streptomyces sp. 142MFCol3... 16870.0e+00
WP_220293211.1 tetratricopeptide repeat protein [Streptomyces sp. MBT84] >l... 16650.0e+00
WP_059133625.1 tetratricopeptide repeat protein [Streptomyces sp. NRRL F-51... 16580.0e+00
WP_201820765.1 AfsR/SARP family transcriptional regulator [Streptomyces sp.... 16010.0e+00
WP_236053285.1 tetratricopeptide repeat protein [Streptomyces musisoli] 15990.0e+00
WP_067116640.1 tetratricopeptide repeat protein [Streptomyces yokosukanensi... 15980.0e+00
WP_208899575.1 tetratricopeptide repeat protein [Streptomyces incarnatus] >... 15600.0e+00
WP_229926877.1 winged helix-turn-helix domain-containing protein [Streptomy... 15560.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.2555 Seems to have no N-terminal signal seq.