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IDSAVERM_4649 TypeCDS
From5672654 nt length825
To5673478 aa length274
Gene pI6.52
Definitionputative DNA-binding protein M.W (Da)30652
NotePF01381: Helix-turn-helix AseI frg.R
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO3421 hypothetical protein4970.0e+00
sgrSGR_4070 putative DNA-binding protein4511.0e-162
samSAM23877_4143 hypothetical protein4933.0e-179
scabSCAB39941 putative DNA-binding protein4865.0e-177
saceSACE_6607 transcriptional regulator, XRE family2763.0e-94
nfarnfa26020 DNA-binding protein2747.0e-75

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain3-6250.22.3e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_095935701.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12741.6e-176
KPH96930.1 helix-turn-helix domain protein [Actinobacteria bacterium OK006] ... 12742.1e-176
GHD59937.1 transcriptional regulator [Streptomyces mirabilis] 12732.6e-176
WP_189188783.1 helix-turn-helix domain-containing protein [Streptomyces alb... 12722.7e-176
WP_054237466.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 12714.3e-176
GAX53204.1 transcriptional regulator [Streptomyces olivochromogenes] 12716.7e-176
WP_051370360.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12698.0e-176
WP_067374354.1 helix-turn-helix domain-containing protein [Streptomyces oli... 12681.3e-175
WP_101399876.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 12671.5e-175
WP_055492014.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12662.8e-175

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.3222 Seems to have no N-terminal signal seq.