| ID | SAVERM_4677
| Type | CDS
|
| From | 5704185
| nt length | 522
|
| To | 5703664
| aa length | 173
|
| Gene |
| pI | 9.17
|
| Definition | putative integral membrane protein
| M.W (Da) | 18616
|
| Note | PF03703: Bacterial membrane flanked domain
| AseI frg. | R
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3393 putative integral membrane protein | 172 | 2.0e-56
|
| sam | SAM23877_4170 Integral membrane protein | 200 | 3.0e-67
|
| scab | SCAB39671 putative integral membrane protein | 213 | 3.0e-72
|
| nfar | nfa47530 membrane protein | 59 | 1.8e-10
|
| mtub | gi|15608367 PROBABLE TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 51 | 2.2e-08
|
| cglu | gi|19551871 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 104 | 2.6e-24
|
| bsub | BG12086 ydbS; hypothetical protein | 56 | 1.0e-09
|
*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| bPH_2 | 1 | Bacterial PH domain | 84-162 | 59.5 | 2.6e-16
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_125528942.1 | PH domain-containing protein [Streptomyces sp. WAC 05379] >g...
| 498 | 4.3e-62 |
|
| 497 | 6.0e-62 |
| WP_153289298.1 | PH domain-containing protein [Streptomyces fagopyri] >gb
| 498 | 9.6e-62 |
| WP_168529324.1 | PH domain-containing protein [Streptomyces sp. RPA4-2] >gb
| 497 | 1.2e-61 |
| WP_190074899.1 | PH domain-containing protein [Streptomyces lanatus]
| 497 | 1.3e-61 |
| GHH26013.1 | hypothetical protein GCM10018780_78610 [Streptomyces lanatus]
| 498 | 1.5e-61 |
| WP_128433582.1 | PH domain-containing protein [Streptomyces cyaneus]
| 498 | 1.5e-61 |
| WP_031487450.1 | PH domain-containing protein [Streptomyces bicolor]
| 498 | 1.5e-61 |
| WP_147994929.1 | PH domain-containing protein [Streptomyces sp. uw30] >lcl
| 497 | 1.6e-61 |
| QWA23551.1 | PH domain-containing protein [Streptomyces sp. JCM17656]
| 497 | 1.8e-61 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.4779 | Seems to have no N-terminal signal seq.
|