| ID | SAVERM_4687
| Type | CDS
|
| From | 5713136
| nt length | 1002
|
| To | 5714137
| aa length | 333
|
| Gene | panC
| pI | 6.32
|
| Definition | putative pantoate--beta-alanine ligase
| M.W (Da) | 35472
|
| Note | pantothenate biosynthesis
| AseI frg. | R
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of coenzymes & prosthetic groups
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3383 putative pantoate-amino acid ligase | 489 | 3.0e-176
|
| sgr | SGR_4108 putative pantoate-amino acid ligase | 380 | 7.0e-133
|
| sam | SAM23877_4179 Pantothenate synthetase | 520 | 0.0e+00
|
| scab | SCAB39591 putative pantoate--beta-alanine ligase | 518 | 0.0e+00
|
| sace | SACE_0406 pantoate--beta-alanine ligase | 214 | 2.0e-68
|
| nfar | nfa4060 panC pantothenate synthetase | 254 | 9.6e-69
|
| mtub | gi|15610738 pantoate--beta-alanine ligase [Mycobacterium tuberculosis H37Rv] | 217 | 7.7e-58
|
| cglu | gi|19551364 COG0414:Panthothenate synthetase [Corynebacterium glutamicum] | 210 | 6.6e-56
|
| bsub | BG11520 panC; pantothenate synthetase [EC:6.3.2.1] | 166 | 1.8e-42
|
| ecoli | gi|16128126 pantoate--beta-alanine ligase [Escherichia coli K12] | 187 | 1.1e-48
|
| paer | PA4730 [gene=panC] [prot=pantoate--beta-alanine ligase] [comment=PA4730] | 198 | 6.6e-52
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Pantoate_ligase | 1 | Pantoate-beta-alanine ligase | 9-325 | 293.6 | 1e-87
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_103552429.1 | pantoate--beta-alanine ligase [Streptomyces populi] >gb
| 1262 | 7.9e-173 |
| WP_046705107.1 | pantoate--beta-alanine ligase [Streptomyces europaeiscabiei]
| 1251 | 3.8e-171 |
| WP_143627609.1 | MULTISPECIES: pantoate--beta-alanine ligase [unclassified St...
| 1247 | 1.6e-170 |
| WP_189188527.1 | pantoate--beta-alanine ligase [Streptomyces albiflavescens] ...
| 1242 | 7.6e-170 |
| WP_030043362.1 | pantoate--beta-alanine ligase [Streptomyces resistomycificus...
| 1241 | 1.1e-169 |
| WP_028799053.1 | pantoate--beta-alanine ligase [Streptomyces sp. 142MFCol3.1]
| 1240 | 2.0e-169 |
| WP_095935735.1 | pantoate--beta-alanine ligase [Streptomyces sp. Tue6028] >gb...
| 1238 | 3.8e-169 |
| WP_194078270.1 | pantoate--beta-alanine ligase [Streptomyces justiciae] >lcl
| 1237 | 5.4e-169 |
| WP_125188567.1 | pantoate--beta-alanine ligase [Streptomyces sp. RP5T] >gb
| 1236 | 7.2e-169 |
| WP_046920035.1 | pantoate--beta-alanine ligase [Streptomyces stelliscabiei] >...
| 1235 | 9.0e-169 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1628 | Seems to have no N-terminal signal seq.
|