| ID | SAVERM_4693
| Type | CDS
|
| From | 5719170
| nt length | 534
|
| To | 5719703
| aa length | 177
|
| Gene |
| pI | 4.77
|
| Definition | hypothetical protein
| M.W (Da) | 19791
|
| Note | PF03965: Penicillinase repressor
| AseI frg. | R
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3377 hypothetical protein | 216 | 3.0e-74
|
| sgr | SGR_4114 conserved hypothetical protein | 195 | 2.0e-65
|
| sam | SAM23877_4186 Transcriptional regulator, MecI family | 216 | 6.0e-74
|
| scab | SCAB39531 hypothetical protein | 214 | 1.0e-72
|
| sace | SACE_0615 transcriptional repressor, CopY family | 83 | 9.0e-22
|
| nfar | nfa25180 hypothetical protein | 77 | 8.5e-16
|
| mtub | gi|15608983 POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN [Mycobacterium tuberculosis H37Rv] | 69 | 1.1e-13
|
| cglu | gi|19551269 COG3682:Predicted transcriptional regulator [Corynebacterium glutamicum] | 56 | 8.6e-10
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Penicillinase_R | 1 | Penicillinase repressor | 1-102 | 72.8 | 2.5e-20
|
| TrmB | 1 | Sugar-specific transcriptional regulator TrmB | 9-60 | 27.4 | 2.1e-06
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_053762947.1 | BlaI/MecI/CopY family transcriptional regulator [Streptomyce...
| 528 | 2.5e-66 |
| WP_055491976.1 | BlaI/MecI/CopY family transcriptional regulator [Streptomyce...
| 525 | 1.5e-65 |
| WP_217569176.1 | BlaI/MecI/CopY family transcriptional regulator [Streptomyce...
| 524 | 1.9e-65 |
| WP_152776901.1 | BlaI/MecI/CopY family transcriptional regulator [Streptomyce...
| 518 | 1.4e-64 |
| SFG65214.1 | Predicted transcriptional regulator [Streptomyces mirabilis]
| 514 | 3.3e-64 |
| WP_229912360.1 | BlaI/MecI/CopY family transcriptional regulator [Streptomyce...
| 515 | 4.8e-64 |
| WP_075032426.1 | BlaI/MecI/CopY family transcriptional regulator [Streptomyce...
| 514 | 5.1e-64 |
| WP_168494263.1 | MULTISPECIES: BlaI/MecI/CopY family transcriptional regulato...
| 511 | 1.4e-63 |
| WP_168529342.1 | BlaI/MecI/CopY family transcriptional regulator [Streptomyce...
| 510 | 1.6e-63 |
| KDN77739.1 | hypothetical protein DF19_01780 [Streptomyces olindensis]
| 511 | 1.9e-63 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2656 | Seems to have no N-terminal signal seq.
|