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IDSAVERM_47 TypeCDS
From56620 nt length1191
To57810 aa length396
Gene pI11.34
Definitionputative IS605 family IS1136A-like transposase M.W (Da)44595
NoteIS200/IS605 family (56610..57918). Inverted repeat sequence (12/15 bp). Target sequence (AT). PF01385: Probable transposase AseI frg.W
SignalP v.4.0Non-secretory protein | plot Categorytransposon & IS

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO3714 putative transposase3021.0e-100
mtubgi|15610022 PROBABLE TRANSPOSASE [Mycobacterium tuberculosis H37Rv]1331.8e-32

*coel, Streptomyces coelicolor A3(2); mtub, Mycobacterium tuberculosis H37Rv;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

OrfB_IS6051Probable transposase176-280100.28e-29

OrfB_Zn_ribbon1Putative transposase DNA-binding domain294-36181.43e-23

HTH_OrfB_IS6051Helix-turn-helix domain1-4868.13e-19

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_168487306.1 RNA-guided endonuclease TnpB family protein [Streptomyces sp... 18040.0e+00
WP_143599894.1 MULTISPECIES: RNA-guided endonuclease TnpB family protein [u... 18040.0e+00
WP_095857146.1 RNA-guided endonuclease TnpB family protein [Streptomyces sp... 17990.0e+00
WP_144314660.1 RNA-guided endonuclease TnpB family protein [Streptomyces sp... 17940.0e+00
WP_143654263.1 RNA-guided endonuclease TnpB family protein [Streptomyces sp... 17930.0e+00
WP_143606864.1 MULTISPECIES: RNA-guided endonuclease TnpB family protein [u... 17930.0e+00
WP_143606569.1 MULTISPECIES: RNA-guided endonuclease TnpB family protein [u... 17890.0e+00
WP_095856862.1 RNA-guided endonuclease TnpB family protein [Streptomyces sp... 17870.0e+00
WP_097282581.1 RNA-guided endonuclease TnpB family protein [Streptomyces sp... 17850.0e+00
WP_143612098.1 MULTISPECIES: RNA-guided endonuclease TnpB family protein [u... 17820.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.2113 Seems to have no N-terminal signal seq.