| ID | SAVERM_4709
| Type | CDS
|
| From | 5739284
| nt length | 1125
|
| To | 5738160
| aa length | 374
|
| Gene |
| pI | 5
|
| Definition | putative DNA-binding protein
| M.W (Da) | 40020
|
| Note | PF02457: Domain of unknown function DUF147
| AseI frg. | R
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | regulation
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3352 putative DNA-binding protein | 704 | 0.0e+00
|
| sgr | SGR_4128 putative DNA-binding protein | 654 | 0.0e+00
|
| sam | SAM23877_4209 DNA integrity scanning protein DisA | 697 | 0.0e+00
|
| scab | SCAB39371 putative DNA-binding protein | 642 | 0.0e+00
|
| sace | SACE_0435 protein of unknown function DUF147 | 416 | 5.0e-146
|
| mtub | gi|15610722 hypothetical protein Rv3586 [Mycobacterium tuberculosis H37Rv] | 402 | 1.5e-113
|
| cglu | gi|19553863 COG1623:Predicted nucleic-acid-binding protein (contains the HHH domain) [Corynebacterium glutamicum] | 319 | 1.2e-88
|
| bsub | BG10150 yacK; unknown | 293 | 8.5e-81
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DisA-linker | 1 | DisA bacterial checkpoint controller linker region | 155-297 | 176.6 | 2.1e-52
|
| DisA_N | 1 | DisA bacterial checkpoint controller nucleotide-binding | 38-150 | 76.0 | 1.6e-21
|
| HHH_2 | 1 | Helix-hairpin-helix motif | 324-361 | 34.2 | 1.9e-08
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_055624674.1 | MULTISPECIES: DNA integrity scanning diadenylate cyclase Dis...
| 1698 | 0.0e+00 |
| WP_093723497.1 | DNA integrity scanning diadenylate cyclase DisA [Streptomyce...
| 1697 | 0.0e+00 |
| WP_217209113.1 | DNA integrity scanning diadenylate cyclase DisA [Streptomyce...
| 1697 | 0.0e+00 |
| WP_067437543.1 | DNA integrity scanning diadenylate cyclase DisA [Streptomyce...
| 1695 | 0.0e+00 |
| WP_062673508.1 | MULTISPECIES: DNA integrity scanning diadenylate cyclase Dis...
| 1693 | 0.0e+00 |
|
| 1693 | 0.0e+00 |
| WP_062725632.1 | DNA integrity scanning diadenylate cyclase DisA [Streptomyce...
| 1693 | 0.0e+00 |
| WP_130438360.1 | DNA integrity scanning diadenylate cyclase DisA [Streptomyce...
| 1692 | 0.0e+00 |
| WP_194042436.1 | DNA integrity scanning diadenylate cyclase DisA [Streptomyce...
| 1691 | 0.0e+00 |
| WP_030049848.1 | DNA integrity scanning diadenylate cyclase DisA [Streptomyce...
| 1691 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2620 | Seems to have no N-terminal signal seq.
|