| ID | SAVERM_4756
| Type | CDS
|
| From | 5799772
| nt length | 339
|
| To | 5799434
| aa length | 112
|
| Gene |
| pI | 7.35
|
| Definition | hypothetical protein
| M.W (Da) | 11920
|
| Note | PF02694: Uncharacterized BCR, YnfA/UPF0060 family
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3297 conserved hypothetical protein | 182 | 8.0e-62
|
| sam | SAM23877_4258 conserved membrane protein of unknown function | 188 | 2.0e-64
|
| scab | SCAB89201 hypothetical protein | 177 | 6.0e-60
|
| sace | SACE_5620 protein of unknown function UPF0060 | 171 | 8.0e-58
|
| nfar | nfa36830 hypothetical protein | 176 | 4.2e-46
|
| mtub | gi|15609776 hypothetical protein Rv2639c [Mycobacterium tuberculosis H37Rv] | 188 | 8.4e-50
|
| bsub | BG12908 yfjF; similar to hypothetical proteins | 99 | 3.6e-23
|
| ecoli | gi|16129540 hypothetical protein b1582 [Escherichia coli K12] | 75 | 1.0e-15
|
| paer | PA3275 [gene=PA3275] [prot=conserved hypothetical protein] [comment=PA3275] | 67 | 3.7e-13
|
*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| UPF0060 | 1 | Uncharacterised BCR, YnfA/UPF0060 family | 3-110 | 148.9 | 4.8e-44
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.2338 | Seems to have a cleavable N-term signal seq.
|