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IDSAVERM_4762 TypeCDS
From5804751 nt length810
To5803942 aa length269
Gene pI6.73
Definitionputative AraC-family transcriptional regulator M.W (Da)29706
NotePF00165: Bacterial regulatory helix-turn-helix proteins, AraC family AseI frg.I
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
sgrSGR_4188 putative AraC-family transcriptional regulator3583.0e-126
scabSCAB38841 putative AraC-family transcriptional regulator4242.0e-152
nfarnfa19040 transcriptional regulator1601.1e-40

*sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_181Helix-turn-helix domain186-26354.11.3e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_128802637.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 9928.3e-134
WP_108014431.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 9911.3e-133
WP_235455502.1 helix-turn-helix transcriptional regulator [Streptomyces oli... 9911.4e-133
WP_128376021.1 helix-turn-helix transcriptional regulator [Streptomyces cav... 9901.9e-133
WP_033319464.1 helix-turn-helix domain-containing protein [Streptomyces yer... 9868.4e-133
WP_141582691.1 AraC family transcriptional regulator [Streptomyces ipomoeae... 9851.1e-132
WP_048820121.1 helix-turn-helix domain-containing protein [Streptomyces ipo... 9841.5e-132
WP_189325873.1 helix-turn-helix domain-containing protein [Streptomyces fla... 9841.5e-132
WP_055493054.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 9841.8e-132
EKX67012.1 transcriptional regulator, AraC family [Streptomyces ipomoeae 91-... 9852.3e-132

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.1464 Seems to have no N-terminal signal seq.