| ID | SAVERM_4824
| Type | CDS
|
| From | 5864704
| nt length | 744
|
| To | 5865447
| aa length | 247
|
| Gene | pilD
| pI | 7.84
|
| Definition | putative leader peptidase (prepilin peptidase) / N-methyltransferase
| M.W (Da) | 25421
|
| Note | Type II secretion system, PF01478: Type IV leader peptidase family
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | protein secretion
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4549 putative type IV peptidase | 261 | 2.0e-88
|
| sgr | SGR_2510 putative type IV peptidase | 193 | 1.0e-61
|
| sam | SAM23877_4372 Type IV peptidase | 226 | 4.0e-75
|
| scab | SCAB38201 putative leader peptidase (prepilin peptidase) | 229 | 7.0e-76
|
| nfar | nfa36340 peptidase | 76 | 1.8e-15
|
| mtub | gi|15609688 hypothetical protein Rv2551c [Mycobacterium tuberculosis H37Rv] | 70 | 1.3e-13
|
| cglu | gi|19552836 COG1989:Signal peptidase, cleaves prepilin-like proteins [Corynebacterium glutamicum] | 64 | 5.1e-12
|
| bsub | BG10323 comC; late competence protein required for processing and translocation of ComGC, ComGD, ComGE, ComGG [leader peptidase (prepilin peptidase) / N-methyltransferase] [EC:3.4.99.- 2.1.1.-] | 63 | 8.4e-12
|
| ecoli | gi|16131214 bifunctional prepilin peptidase: leader peptidase; N-methyltransferase; part of general secretion pathway (GSP) [Escherichia coli K12] | 69 | 2.3e-13
|
| paer | PA4528 [gene=pilD] [prot=type 4 prepilin peptidase PilD] [comment=PA4528] | 79 | 3.0e-16
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Peptidase_A24 | 1 | Type IV leader peptidase family | 101-212 | 66.0 | 3.2e-18
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.5034 | Seems to have no N-terminal signal seq.
|