| ID | SAVERM_4844
| Type | CDS
|
| From | 5888107
| nt length | 1365
|
| To | 5889471
| aa length | 454
|
| Gene | nuoH1
| pI | 6.16
|
| Definition | putative NADH dehydrogenase I chain H (complex I)
| M.W (Da) | 50270
|
| Note | PF00146: NADH dehydrogenase
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | membrane bioenergetics
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4569 nuoH NADH dehydrogenase subunit | 771 | 0.0e+00
|
| sgr | SGR_2977 putative NADH dehydrogenase chain H | 765 | 0.0e+00
|
| sam | SAM23877_4390 NADH-quinone oxidoreductase subunit H | 791 | 0.0e+00
|
| scab | SCAB38021 putative NADH dehydrogenase I chain H (complex I) | 809 | 0.0e+00
|
| sace | SACE_6895 NADH dehydrogenase I chain H | 461 | 1.0e-161
|
| nfar | nfa26600 nuoH NADH dehydrogenase I chain H | 495 | 3.6e-141
|
| mtub | gi|15610288 NADH dehydrogenase subunit H [Mycobacterium tuberculosis H37Rv] | 476 | 1.0e-135
|
| ecoli | gi|16130217 NADH dehydrogenase subunit H [Escherichia coli K12] | 233 | 2.6e-62
|
| paer | PA2643 [gene=nuoH] [prot=NADH dehydrogenase I chain H] [comment=PA2643] | 216 | 2.6e-57
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| NADHdh | 1 | NADH dehydrogenase | 24-347 | 412.6 | 8.4e-124
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| GHG38380.1 | hypothetical protein GCM10018980_11040 [Streptomyces capoamus]
| 1944 | 0.0e+00 |
| WP_016437639.1 | NADH-quinone oxidoreductase subunit NuoH [Streptomyces sp. H...
| 1942 | 0.0e+00 |
|
| 1940 | 0.0e+00 |
| WP_108014522.1 | MULTISPECIES: NADH-quinone oxidoreductase subunit NuoH [uncl...
| 1939 | 0.0e+00 |
| WP_161288982.1 | MULTISPECIES: NADH-quinone oxidoreductase subunit NuoH [uncl...
| 1939 | 0.0e+00 |
| WP_066995471.1 | NADH-quinone oxidoreductase subunit NuoH [Streptomyces cello...
| 1938 | 0.0e+00 |
| WP_129307476.1 | NADH-quinone oxidoreductase subunit NuoH [Streptomyces sp. L...
| 1938 | 0.0e+00 |
| WP_053708963.1 | NADH-quinone oxidoreductase subunit NuoH [Streptomyces sp. N...
| 1937 | 0.0e+00 |
| WP_030945306.1 | NADH-quinone oxidoreductase subunit NuoH [Streptomyces sp. N...
| 1936 | 0.0e+00 |
| WP_127178548.1 | NADH-quinone oxidoreductase subunit NuoH [Streptomyces grise...
| 1935 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.4312 | Seems to have a cleavable N-term signal seq.
|